KEGG   Pangasianodon hypophthalmus (striped catfish): 113532425
Entry
113532425         CDS       T05759                                 
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1
  KO
K11136  regulator of telomere elongation helicase 1 [EC:5.6.2.3]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phyp03032]
    113532425 (rtel1)
Enzymes [BR:phyp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     113532425 (rtel1)
DNA replication proteins [BR:phyp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    113532425 (rtel1)
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 ResIII DEAD
Other DBs
NCBI-GeneID: 113532425
NCBI-ProteinID: XP_026779661
Position
Unknown
AA seq 1175 aa
MPSLTLRGVTVDFPFTPYPCQTDYMSKVIECLQNKVNGVLESPTGTGKTLCLLCAALGWR
AYFKDSISARKIAERMGGAELFPDRSMSSWGTAATDGETPAYYTDIPKIIYASRTHSQLT
QVISELKNTSYRPKICVLGSREQLCINQEVMKQESNHVKVHMCRAKVSSRSCVFYNNVDE
KSTDKDIINSILDVEDLVKTGKKERVCPYYLSRSLKQHADLIFMPYNYLLDPKSRRAHNI
ELKGAVVIFDEAHNVEKMCEESTSFDLTPYDLTTAIDAVDKLLREQASDIGKGESSEDFN
AESLNSGLNLDITTIAKIKQILMDLEIAINSFEMPYNNQGITKPGSFIYELLQKAHVNYD
TKTAVVEAMEQITGYLAGKPGIFLNTSGLQKVADIIQLVFAVEPAEGGMQSHKGNSMQQF
KVHIHPDTSNFKKKQSTDLWASSSTRKQGNVLSYWCFSPGFSMQDLLRQEVRCIILTSGT
LSPLSSFTCEMQIPFPVCLENPHVIQKDQIFVSIIDKGPDGVQLSAAFDRRFVPENMASL
GNTIVNLSRVVPHGLLVFFPSYPVLDKTLEYWKASGHVDRIESMKPMFVEPKGKGTFTEV
MDGFYDKVNDSKANGGSFFAVCRGKVSEGLDFADTYGRGVIITGLPYPPRMDPRVVLKMQ
YLDEMCKNKTSGVKYLSGNEWYRQQASRAVNQAIGRVIRHREDYGAIFLCDYRFKNLDVR
QQLPSWVRPYVRTYENFGTVVRDAAQFFRVAQKLRPVPEKKMKGTGCESQTAKATSQSSP
GCSRSAQSAWECSSSLKAKVFDSHVPSLKRRKLGEHLERDGTARLCIQYEMEMSSSKNRP
MSLLDALDESDPNRDEDDTFVGEEKASRLSTLSLQHDKRMDDESRGGKRKIRVVQDRKPI
DSSAAGKGKAFMLELKRSLSLESFTQIMHALQVYKATDNLNDLVAKAADLLIQDPNTHIL
LRGLYQFVRPHHKKQFDEKCELLTGKGCGYKPEHSLSREERALLMKQTAKVETSEMCTTT
QLDSSRQLNQGGSHLGTHNLCGMDASGKDQKLQQSGKESQFSASLLSDIKKAIGAEKTNQ
LFVALQTYKKTNDYEQMVSTVVGLLTERDEDIILLKRLTAFIPAPHRQQFSEMLISLTGS
VSMPCQDSDEVSSPPISVSQLCAGKSQSKISSFFS
NT seq 3528 nt   +upstreamnt  +downstreamnt
atgccttctcttactttaagaggagttactgtggattttccctttactccatatccatgc
cagacggattatatgagcaaagtgattgagtgcctgcaaaataaagtaaatggagttctt
gagagtccaactggcacagggaaaaccctgtgcttgctttgtgctgcgcttggctggagg
gcgtatttcaaagactccatatccgcccgcaagattgcagagagaatgggaggtgctgag
ctttttcctgacaggtcgatgtcatcttggggaacagcagcaactgacggagaaacacca
gcatattacacagacattcccaaaatcatctacgcatcgaggacacattctcagttgacc
caggtcatcagcgagctcaagaacacatcctacaggccgaagatttgcgttctgggctcc
agagaacaactgtgtatcaaccaagaagtaatgaagcaagaaagcaaccatgtcaaggtc
catatgtgccgagcaaaagtgtcgtcccgctcttgtgtcttctacaataatgttgatgag
aagagtaccgacaaggacatcataaactctatcctggacgttgaagatcttgtgaaaact
gggaaaaaggaaagggtgtgtccatattatctgtctcgctctctgaagcagcatgccgac
ctcatattcatgccctacaactacctccttgatccaaagagtcgtcgagcacacaacata
gagcttaaaggagccgttgtcatatttgatgaagcacataatgtggagaagatgtgtgaa
gaatctacctcgtttgacctgactccttacgatttgactacagccattgatgctgtagac
aagcttttgagggagcaggcctcagatattggcaaaggagaatcttcagaagatttcaat
gctgaatctttaaactcaggtctgaacctggacatcaccactattgctaaaataaaacaa
attttaatggacctggagattgccataaatagctttgagatgccttacaataaccagggg
attaccaagcctggcagttttatttatgagcttttgcaaaaggcccacgtaaactacgac
actaaaaccgcagttgtggaggcgatggagcagatcacaggatatttagcaggaaagcct
ggtatcttcctcaacaccagtggactgcagaaagtcgcagatataatacaattggtgttt
gcagttgaacctgcagagggcggtatgcaatcacacaaggggaacagcatgcagcagttt
aaggtacacattcatccagacactagcaatttcaagaaaaagcagagcactgatctgtgg
gcgtcctcttctacaaggaaacaagggaatgtgctgagttactggtgtttctccccggga
ttcagcatgcaagatctcctcaggcaggaagtgcgctgcatcatcctgactagtggcacc
ctgtcacccctgtcatccttcacctgcgaaatgcagatcccctttcctgtgtgtctggag
aaccctcatgtcattcagaaggaccagatctttgtcagcattattgacaaaggaccggac
ggcgtgcagctcagcgcagccttcgacaggaggtttgttcctgagaacatggcatcatta
ggaaacactattgtaaatttgagtcgagtggttcctcatggcctgctagtgtttttccct
tcgtacccggtgttggataagacgcttgaatattggaaggctagcggtcatgtagaccgc
attgagtcaatgaagcccatgtttgtggaacccaaaggaaaaggtacctttacagaggtt
atggatggcttttatgacaaggtaaatgactccaaggcaaacggaggaagcttctttgct
gtatgtagaggaaaggtgagtgaagggttggactttgcagacacgtatggccgtggagtg
atcatcactggccttccctatcctccgagaatggaccccagggtggtgctgaagatgcag
tatttggatgagatgtgcaaaaacaaaaccagcggtgtaaagtatctgtctgggaacgag
tggtacaggcagcaggcctcccgcgctgtgaaccaagctatcggtagagtgatccgccac
cgcgaggattacggtgccatctttctttgtgactacaggttcaaaaatttggatgtacga
cagcagctcccttcttgggtcagaccttacgttcgaacttatgaaaactttggcaccgtg
gtccgtgatgctgcacagtttttccgggttgcacaaaagcttaggcctgtgccagagaag
aagatgaaaggtacagggtgtgagagccagacagctaaagccaccagccagtcaagtcca
gggtgcagtcgttcagctcagagtgcctgggagtgcagttcctctctcaaagccaaagtg
ttcgactctcatgtgccaagtctaaagaggaggaaactgggcgagcacttggagagagat
gggacagccaggctttgcatccagtacgagatggagatgagttccagtaagaacagaccc
atgagcctgcttgatgctctggatgaaagcgaccctaatcgagatgaggatgataccttt
gttggggaggagaaggccagccgtttgtccacattatctctacaacatgataagcgcatg
gatgatgaatcgaggggagggaaacgcaaaatcagagtagtgcaagaccggaaacccata
gactccagcgcagcaggcaaaggcaaggcctttatgctggagctgaagagaagtttaagt
ctggagagcttcacgcagatcatgcatgcacttcaggtgtacaaggccacagataacctc
aatgaccttgtggcaaaagcagcagaccttctcatacaagatcccaacacacacatcctg
ctgagaggactctaccagtttgttcggccacaccacaagaagcagtttgatgagaagtgt
gagctccttacaggcaaaggctgtggttacaaacctgagcactcactctctagggaggag
agagcattactcatgaaacaaacagccaaagtggagacttctgaaatgtgcacaaccact
caactagactcaagcaggcagctcaatcaaggtggatctcatctgggaacgcataatttg
tgtggaatggatgcaagtgggaaggatcagaagctacaacagtcaggcaaagagagtcaa
ttcagtgcttccctgctgtctgatataaaaaaggctattggtgctgagaagacaaatcag
ctttttgtagcgttgcaaacgtacaagaaaactaatgattatgaacagatggtatcaaca
gttgtggggttgctgactgagcgtgatgaagacattattcttctaaaacgcttaacagct
ttcattccagctccccatcgtcagcagttctctgagatgttaatatccttgactgggagt
gtttcaatgccttgccaggattcagatgaggtttctagtcccccaatttcagtttcacag
ctctgtgcaggaaaatcacaaagcaagatatcgtccttcttctcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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