KEGG   Pangasianodon hypophthalmus (striped catfish): 113539431
Entry
113539431         CDS       T05759                                 
Name
(RefSeq) syntaxin-3-like
  KO
K08486  syntaxin 1B/2/3
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    113539431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113539431
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113539431
Membrane trafficking [BR:phyp04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    113539431
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   113539431
  Exosomal proteins of other body fluids (saliva and urine)
   113539431
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 ATG17_like Relaxase_C HMMR_N AAA_13 FlaC_arch Occludin_ELL Baculo_PEP_C YtxH Glyco_trans_A_1 Tox-URI2 DUF3540 DUF6664 DUF2746 DUF6827 FUSC DUF3291 Laminin_II Fib_alpha Allexi_40kDa BLOC1_2 Folliculin
Other DBs
NCBI-GeneID: 113539431
NCBI-ProteinID: XP_026790974
Position
Unknown
AA seq 285 aa
MKDRLAQLKEKTDQAPDDVEIQVENKEFMDEFFAQIEEIRTSIEKIDENVTEIKRLYSLI
LSAPTSDQKTQDDLEAITNEIKKLANNVRNKLKSIEQSLESNAEERVSADMRIKKSQHAV
LARKFVEVMTRYNEAQVEFRDKSKGRIQRQLEITGKTTTDEELEEMLDGGNAAVFTAGIV
DSAISKQALSEIEARHKDIMRLESSIKELHDMFVDIAMLVENQGSIIDRIESNMDQSVGF
VERAVADTKKAAKFQQEARRKQMMITLCCIILAVIIGSLVYSWLK
NT seq 858 nt   +upstreamnt  +downstreamnt
atgaaggaccgactggcacagctgaaggagaaaacagaccaagcacctgatgatgtggag
atccaggtggaaaataaagaatttatggatgagttctttgctcagattgaagagatccgc
accagtattgagaagattgatgagaatgtgactgagataaagcgcctgtattctcttatc
ctctctgcacctacctcagaccaaaagacacaagacgacctggaagccatcaccaatgaa
atcaagaaattagccaacaacgttcgcaacaaactcaaaagcatcgagcagagtttggag
tcaaatgcagaggagagagtttcagccgatatgcggataaagaaatctcagcacgctgtc
ctagcaagaaagtttgtggaggttatgaccaggtacaatgaagcacaagtagaattcaga
gacaagagcaaagggcggatccagagacagctagagatcacgggtaaaaccaccactgat
gaggagctggaggagatgctggacggtggcaatgctgctgtcttcacagcagggatcgtg
gactcggccatctccaagcaggccttgagtgaaattgaagcgagacacaaagacatcatg
agactggagagcagcattaaggagctgcatgacatgtttgtggacattgccatgctagtg
gagaatcagggaagcataattgacaggattgaaagcaacatggaccagtctgtgggcttc
gtggaacgagcagtggctgacaccaaaaaagcagccaagttccaacaggaagcccggagg
aaacagatgatgatcacattgtgttgcatcattcttgcggtcatcattggctccctcgtg
tacagctggttgaagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (24)   
   Pfam (24)   
All databases (34)   

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