KEGG   Scheffersomyces stipitis: PICST_57234
Entry
PICST_57234       CDS       T01023                                 
Symbol
RRP3
Name
(RefSeq) ATP-dependent rRNA helicase RRP3
  KO
K14777  ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
Organism
pic  Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pic03009]
    PICST_57234 (RRP3)
Enzymes [BR:pic01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PICST_57234 (RRP3)
Ribosome biogenesis [BR:pic03009]
 Eukaryotic type
  90S particles
   Helicases
    PICST_57234 (RRP3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30
Other DBs
NCBI-GeneID: 4838114
NCBI-ProteinID: XP_001383517
JGI: 57234
UniProt: A3LS22
Position
3:1215173..1216363
AA seq 396 aa
MKFSKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWEAQTPYFGLVLAPA
RELAYQIKETFDALGSTMGVRTVCLVGGMDMMDQARDLMRKPHIIIATPGRIMDHLEHTK
GFSLKMLKYFVMDEADKLLDLEFGPVLDKILKQIPSKRTTYLFSATMTNKIEKLQRASLH
NPVRVAVSSKYQTADNLIQSMMLVSDGYKNTYLIHLLNEFVGKSIIIFARTRAHTQRTSI
LCRILGFSAVPLHGDLTQAQRLGSLNKFKSGTANILIATDVAARGLDIPSVDVVINYDIP
TDSKAYVHRVGRTARAGRSGKSISLVTQYDLEMYLRIEQSIQKKLPKDPSPPKAMLDALH
VHVDRAYAEAIRQTKEFHEKTRRGRRGKDDKDREEH
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgaagttttccaagcctacacccattcagtctgaagccattcctcatgctttggaaggc
aaggacatcattggattagcgcaaactggttccggtaagactgctgcatttgccattcct
attcttcaatcgttgtgggaagcacagacaccatattttggacttgtattggctccagcc
agagagttggcatatcaaatcaaagaaacattcgatgctcttggttccaccatgggagtt
agaactgtttgtcttgtaggaggaatggatatgatggaccaggctagggacttaatgaga
aaaccacacattatcattgctacacctggtagaatcatggatcatttggagcataccaag
ggcttctcacttaagatgttgaaatattttgttatggacgaagccgataagcttttggat
ttggagtttggaccagttttggacaaaatcttgaagcagattccttccaaaagaacaaca
tacttattttctgctactatgacaaacaagattgagaagttacagagggcctcattgcac
aacccagtgagagtagcggtgtccagcaagtaccagactgccgacaacttgatccagctg
atgatgcttgtcagtgacgggtacaaaaatacctacttgatccacttgttgaacgagttt
gtagggaaatccattatcatttttgccagaaccagagcgcatactcagagaacttccatt
ctctgtagaatcctaggattttctgctgtgcctttacatggagatttaacccaggctcaa
cgtttgggttcgttgaacaagttcaaatcaggcactgccaatatcttgattgcaactgat
gttgcagcaagaggattagatatcccttcagtagatgtggttattaattacgatattcct
actgattcaaaagcatacgttcacagagtaggcagaactgctcgtgctggaagatctggt
aaatcgatttctctagtcacccagtatgacttggaaatgtatctacgtattgaacagctg
atccagaaaaagttgcctaaagatccttccccaccaaaggcaatgttggatgctttgcat
gtccacgttgatagggcctatgctgaagctatcagacaaacaaaggagttccatgagaag
accagaaggggcagaagaggtaaggacgacaaggatagagaagaacactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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