KEGG   Pleomorphomonas sp. SM30: OHA_1_03345
Entry
OHA_1_03345       CDS       T05766                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
pleo  Pleomorphomonas sp. SM30
Pathway
pleo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pleo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OHA_1_03345 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pleo03019]
    OHA_1_03345 (pnp)
   03016 Transfer RNA biogenesis [BR:pleo03016]
    OHA_1_03345 (pnp)
Enzymes [BR:pleo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     OHA_1_03345 (pnp)
Messenger RNA biogenesis [BR:pleo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     OHA_1_03345 (pnp)
Transfer RNA biogenesis [BR:pleo03016]
 Prokaryotic type
  tRNA degradation factors
   OHA_1_03345 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 PCB_OB
Other DBs
NCBI-ProteinID: BBE73729
Position
1:complement(3643994..3646123)
AA seq 709 aa
MFDTQKVEIDWAGRKLTLETGRVARQADGAVLATYGESTVLATVVSAKEPKPGQDFFPLT
VNYQEKAFAAGKIPGGYFKREGRPSEHETLTSRLIDRPIRPLFPEGYKCDTQVIVTTLSH
DMENAPDILAMVAASAALTLSGVPFMGPIGGARVGLIDGEFVLNPAVDSMADSKLDLVVA
GTQDAVLMVESEAQELDEDTMLAAVMFGHRGFQPVIDAIIRLAERAAKEPRDFTPVDHSA
IEAKMLEIAETDLRAAYRITAKQERYAAVDAAKAKVMAAFFPEGGEPAFSKEQVGAVFKD
LQAKIVRWNILDTGSRIDGRDLSTVRPIVAEVGILPRAHGSALFTRGETQALVVATLGTG
EDEQFVDALEGTFKQHFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAVHPMLPAKH
EFPYTIRVVSEITESNGSSSMATVCGSSLALMDAGVPLKAATAGIAMGLIKEGDRFAVLS
DILGDEDHLGDMDFKVAGTENGVTSLQMDIKITGITEEIMKVALEQARGGRRHILGEMAK
AITGARSELGEHAPRIEVMKIPTDKIREVIGSGGKVIREIVEKTGAKIDIQDDGTVKFAS
SDLKAIQAAMNWVKGIAAEPEVGAVYEGTVVKVVEFGAFVNFFGSRDGLVHVSQLAPQRV
QNVKDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQKTGQEIKGEDKAEG
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgttcgacacccagaaagtcgagatcgactgggccggccgcaagctgaccctcgagacg
ggccgcgtcgcccgccaggccgacggcgccgtgctcgccacctacggcgagagcaccgtg
ctcgccaccgtcgtctccgccaaggaaccgaagcccggccaggacttcttcccgctgacg
gtgaactaccaggagaaggccttcgcggccggcaagatccccggtggctacttcaagcgc
gagggccgtccgtccgagcacgagaccctgacctcgcgcctgatcgaccgtccgatccgc
ccgctgttccccgagggctacaagtgcgacacccaggtgatcgtgacgacgctgtcgcac
gacatggagaacgcgccggacatcctcgccatggtcgccgcctcggcggcgctgacgctc
tccggcgtgcccttcatgggcccgatcggcggcgcccgcgtcggcctgatcgacggtgag
ttcgtgctcaacccggccgtcgactcgatggccgactccaagctcgacctcgtggtcgcc
ggcacccaggacgccgtcctgatggtcgagtcggaggcccaggagctcgacgaggacacc
atgctcgcggcggtcatgttcggccaccgcggcttccagccggtgatcgacgcgatcatc
cgcctcgccgagcgcgccgccaaggagccgcgcgacttcaccccggtcgaccattcggcg
atcgaggcgaagatgctggagatcgcggagacggacctgcgcgccgcctaccgcatcacc
gccaagcaggagcgctacgccgccgtcgacgccgccaaggcgaaggtgatggccgccttc
ttccccgagggtggcgagcccgccttctcgaaggagcaggtcggcgcggtgttcaaggac
ctgcaggcgaagatcgtccgctggaacatcctcgacaccggctcgcgcatcgacggccgc
gacctctcgacggtccgcccgatcgtcgccgaggtcggcatcctgccgcgcgcccacggt
tcggcgctgttcacccgcggcgagacgcaggccctcgtggtcgccaccctcggcaccggc
gaggacgagcagttcgtcgacgccctcgagggcaccttcaagcagcacttcatgctgcac
tacaacttcccgccctattccgtgggcgagaccggccgcatgggctcgcccggccgccgc
gagatcggccacggcaagctcgcctggcgcgccgtccacccgatgctgccggccaagcac
gagttcccctacaccattcgcgtggtctcggagatcaccgagtccaacggctcgtcgtcg
atggccaccgtctgcggttcgtcgctggcgctgatggacgcgggcgtgccgctcaaggcc
gccaccgccggcatcgccatgggcctgatcaaggaaggcgaccgtttcgccgtgctgtcc
gacatcctcggcgacgaggaccacctcggcgacatggacttcaaggtcgccggcaccgag
aacggcgtcacctcgctgcagatggacatcaagatcaccggtatcaccgaggagatcatg
aaggtcgcgctggagcaggcccgcggcggccgccggcacatcctcggcgagatggccaag
gcgatcaccggcgcccgctccgagctcggcgagcacgccccgcgcatcgaagtgatgaag
atcccgaccgacaagatccgcgaagtgatcggctcgggcggcaaggtcatccgcgagatc
gtggagaagaccggcgccaagatcgacatccaggacgacggcaccgtcaagttcgcctcg
agcgacctcaaggcgatccaggccgcgatgaactgggtcaagggcatcgccgccgagccg
gaggtcggcgcggtctacgagggcaccgtggtcaaggtcgtcgagttcggcgccttcgtg
aacttcttcggttcgcgcgacggcctcgtccacgtctcccagctcgccccgcagcgcgtc
cagaacgtcaaggacgtcgtcaaggaaggcgacaaggtctgggtcaagctgatgggcttc
gacgagcgcggcaaggtccgcctctcgatgaaggtcgtcgaccagaagaccggtcaggag
atcaagggcgaggacaaggccgagggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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