KEGG   Planococcus sp. PAMC 21323: Plano_1939
Entry
Plano_1939        CDS       T03510                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
pln  Planococcus sp. PAMC 21323
Pathway
pln03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Plano_1939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pln03400]
    Plano_1939
Enzymes [BR:pln01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Plano_1939
DNA repair and recombination proteins [BR:pln03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Plano_1939
SSDB
Motif
Pfam: PriA_3primeBD DEAD ResIII PriA_C PriA_CRR Helicase_C nSTAND3 PIF1 AAA_19 T2SSE zinc-ribbons_6 AAA_30 AAA_11 zf-ISL3
Other DBs
NCBI-ProteinID: AIY05904
UniProt: A0A0B4RCN1
Position
complement(1956095..1958491)
AA seq 798 aa
MIAEVIVDVAAHPIDRPFDYAIPESVEVLAEPGMRVKVPFGNRKVLGFITKIKQISDFDL
KRIKPIHELMDVIPVLNEELLQMAQWMKKQTVCFEIDALQVMVPAALRAKYEKRFVLKAE
LEEIAPPLRPYFENRSFIRLQDAVDIYALLKKEMDKGTILADTDIQQQTAVKKVRMIHIA
ESEEALKAIDIRANAKQQLKLMEYFLKNTGQAIESSQLQKIAGVSLPTIYSLVDKGAAQI
SNMESYRDPKLLTNIEHKASLKLTAAQQTAFDQIESALNTSKTFLLHGITGSGKTEIYLQ
TIDQVLKQGKEAIMLVPEISLTPQMTIRFKERFGDQVAVLHSGLSAGEKYDEWRKIQRAE
VKVVVGARSAIFAPFQNLGLIILDEEHESSYKQDDSPRYHARDMAIWRSEYHKCPVILGS
ATPSLESYARAQKGVYELLVLEKRAKNQPLPDVHIVDMREELRNGNRSMFSVQLADAIRD
RLDKKQQTVLFLNKRGYSSFVLCRDCGTVMQCPNCDISLTYHRSSEMMKCHYCGYDERVP
MTCPECESEHIRFFGTGTQKVEEELAKVVPEARVLRMDVDTTRTKGAHEKILSAFGEGKA
DILLGTQMIAKGLDFPNITLVGVLSADTTLHLPDFRAAEKTYQLLTQVSGRAGRDVLPGT
VFVQSYTPEHYAITLAKDQLYEPFYEQEMAMRRASGYPPYYFVVNIQFTHEDLMTVAEYA
DQSVRYLKGQLSPNTLIIGPSASLISRVNNRYRYQCLIKYKKESKLIDTMQQLIKIHRTE
WLKKGATLSIDMNPTSVM
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgatagctgaagttattgtggacgttgctgcacatccaatcgatcggccatttgactat
gccattccagagagtgtggaagttttggcagagccgggaatgcgtgtgaaagtgccgttt
ggcaatcgcaaagtgcttggatttataacgaaaattaaacagatttctgattttgatcta
aaacgaataaaaccaatccatgagctgatggacgtcataccagtattaaacgaagaatta
ctacaaatggcacagtggatgaaaaaacaaaccgtttgttttgaaattgatgccttgcaa
gtaatggttccagctgctttacgtgcgaaatacgaaaagcgttttgtgctaaaagcagaa
cttgaagaaattgcacctccattgcgaccttattttgaaaaccgttcttttattcggctg
caggatgcagtcgacatctatgcattactaaaaaaagagatggataaaggaacaatctta
gctgatacggatattcagcagcaaacagctgttaagaaggtaaggatgattcatatcgct
gaaagtgaagaagcacttaaagcgatagacattcgtgcaaacgctaaacagcaactaaaa
ctaatggagtattttttaaaaaatacgggacaagcgattgaatcgtcacaacttcaaaaa
atcgctggtgtttcattgccgacgatttatagtttagttgataaaggtgctgctcaaatt
tcaaatatggagtcttatcgtgatcctaaattactaacgaatatcgaacacaaagcttct
ttaaagctaacagcagcacaacaaactgcttttgatcagattgaatcagcattaaatacc
tccaaaacattcttgttgcacggtattacgggcagtgggaaaacggagatttatttgcaa
actatcgatcaagttttaaaacaaggcaaagaagccatcatgctagtacctgaaatatca
ttaacgcctcaaatgacgattcggtttaaagaacgctttggtgatcaagtcgccgtttta
cacagtggcttatcagctggtgaaaagtatgatgaatggcgaaagattcaacgagcagaa
gtaaaagtagtcgttggagcacgttctgccatttttgcgcctttccagaatttaggtctt
attatacttgatgaagaacatgaatcgagctataagcaagatgattcgccgcgttaccat
gcccgagatatggccatatggcgtagtgagtatcataaatgtccggttattttagggagt
gcaacaccttcactagaatcatatgcccgtgcgcaaaaaggggtttatgaattattggtg
ttagaaaaacgtgcgaaaaaccagcccttgcctgatgtgcatattgttgatatgcgagaa
gaactgcgaaatggtaaccgatcaatgttttctgtccaattggccgatgcaattcgcgat
cgattagacaagaagcaacaaacggtgttgtttttaaataaacgtgggtattcatctttt
gttttatgccgagattgcggaacggttatgcaatgtccaaattgtgatatttcattgacc
tatcaccgttcaagtgaaatgatgaaatgtcattattgtggctatgacgagcgcgtacca
atgacttgtccggaatgcgaaagtgaacatattcgcttttttggaacgggtactcaaaaa
gtagaagaagaactagcaaaagtcgtaccagaagcacgcgttttacggatggacgttgat
acaacacgtaccaaaggagcgcatgaaaaaatcctttcagcatttggcgaaggtaaagca
gatattttgcttggaacacagatgattgccaaaggcttggatttcccgaatatcacacta
gtgggtgtgttgtcggcagatacgacacttcatttacctgattttcgagcggcagaaaag
acgtatcaattgctaacgcaagttagtgggcgtgcaggacgtgatgtattgcctggaaca
gtatttgtccaatcctatacaccagaacattacgcaattactttagcaaaagatcaacta
tatgagccattttacgaacaagaaatggccatgcgaagagccagtggctatccaccttat
tattttgtcgtaaatattcaatttacacatgaagacttaatgacggtggctgaatatgca
gatcaaagcgtgcgttatttaaaaggtcaattgtcaccaaataccttaattatcgggcct
tcagcgtcgttgatctctcgcgtcaataatagatatcgctatcaatgtttgataaaatac
aaaaaagaatcaaaattaatcgacacgatgcagcaattgatcaaaattcatcgaacagag
tggctgaaaaaaggtgccacactgtcgatcgatatgaatccaacatcggttatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (47)   

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