KEGG   Pseudomonas mendocina NK-01: MDS_0028
Entry
MDS_0028          CDS       T01473                                 
Name
(GenBank) chaperone
  KO
K11907  type VI secretion system protein VasG
Organism
pmk  Pseudomonas mendocina NK-01
Pathway
pmk02025  Biofilm formation - Pseudomonas aeruginosa
pmk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MDS_0028
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    MDS_0028
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmk02044]
    MDS_0028
Secretion system [BR:pmk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   MDS_0028
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 Sigma54_activat AAA_25 Zeta_toxin TniB nSTAND3 NACHT AAA_7 ATPase_2 AAA_18 Clp_N Hpr_kinase_C CbiA Torsin
Other DBs
NCBI-ProteinID: AEB56059
Position
33583..36255
AA seq 890 aa
MGEISRTALFGKLNSVGYKAIEAATVFCKLRGNPYVELAHWLHQLLQLQDSDLHRIIRQF
SLEPARLARDLTDALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGEHQVRTGYLIIG
ILKTPSLRQVLLGLSGEFAKIKVETLSERFDEYVGDSPENNLAANDGFAAAAPGEASGAM
APAAMGKQEALKRFTIDLTEQARKGELDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGV
GKTAVVEGFALRIAAGDVPPSLKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQASP
KPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGSLRTVAATTWAEYKKHIEKDPALT
RRFQVVQVPEPSEDKALLMMRGVASTMEKHHQVQILDEALDAAVKLSHRYIPARQLPDKS
VSLLDTACARVAISLHAVPAEIDDSRRRIEALETELQIIAREHAIGIDVSLRQANSESLL
AAERERLAELESRWAEEKQLVDELLATRASLRESAGVVDQDSGTDHQALRARLVELQQRL
SQLQGEAPLILPTVDYQAVASVVADWTGIPVGRMARNEVETVLNLDSLLGKRIIGQDHAL
KMIAKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETALALAEALYGGEQNLITINMSEF
QEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEVEKAHPDVHEIFFQVFDKG
VMEDGEGRLIDFKNTLILLTTNAGTEQVARLCQDADNLPDPESIARDLRQPLLEIFPPAL
LGRLVTIPYYPLSDTMLKAITRLQLGRIKKRIESTHKVPFDYDEAVVDLVVSRCTESESG
GRQIDAILTNGMLPDMSREFLTRMMEGKPLAGVRVSVADNDLNYSFADNA
NT seq 2673 nt   +upstreamnt  +downstreamnt
atgggtgaaatcagtcgtaccgcgctgttcggcaagctcaacagcgtcggctacaaggcc
atcgaggccgccaccgtgttctgcaagctgcgcggcaatccctacgtcgagttggcgcac
tggttgcaccagctcctgcaactgcaggactccgacctgcaccgcatcatccgccagttc
agcctggagccggcgcgcctggcgcgtgacctgaccgacgcactcgaccgcctgccgcgc
ggctcgacctcgatcaccgacctgtcctcgcacgtcgaggaagcggtcgagcgtggctgg
gtctacggcagcctgatgttcggcgagcaccaggtgcgcaccggctacctgatcatcggc
atcctcaagacgccgagcctgcgccaggtgctgctgggcctgtcgggcgagttcgccaag
atcaaggtggagaccctcagcgagcgcttcgacgaatacgtcggcgattcgccggagaac
aacctggccgccaacgacggtttcgccgccgctgccccgggcgaggccagtggcgccatg
gcgccagcggcgatgggcaagcaggaggcgctcaagcgcttcaccatcgacctcaccgag
caggcgcgcaagggcgagctggaccccatcgtcggccgcgatgaggagatccgccaactg
gtcgacatcctcatgcgccgccgccagaacaacccgatcctcaccggtgaagccggcgtc
ggcaagaccgccgtggtcgagggtttcgccctgcgcatcgccgccggtgacgtgccgccc
tcgctcaaggatgtggagctgcgcagcctggatgtcggcctgctgcaggccggcgccagc
atgaaaggcgagttcgagcagcgcctgcgtcaggtcatcgaagacgtgcaggcctcgccc
aagccgatcatcctgttcatcgacgaagcccacaccctggtcggcgctggtggtgcggcc
ggtactggcgacgcggccaacctgctcaagccggcgctggcgcgcggcagcctacgcacc
gtcgccgccactacctgggccgagtacaagaagcatatcgagaaggacccggcgctgact
cgtcgcttccaggtggtgcaggtgcccgagccgtccgaggacaaggcgctgttgatgatg
cgcggcgtggcctcgaccatggagaaacaccaccaggtgcagattctcgacgaggccctg
gacgctgcggtcaagctctcgcaccgctacatcccggcgcgccagctgccggacaagtcg
gtcagcctgctcgataccgcctgcgcccgtgtggccatcagcctgcacgccgtaccggcc
gagatcgacgacagccgccggcgcatcgaagcgctggaaaccgaactgcagatcatcgcc
cgcgagcacgccatcggcatcgacgtcagcctgcgtcaggccaacagcgagagcctgcta
gccgccgaacgcgagcgcctggccgagctggaaagccgctgggccgaagagaagcagctg
gtcgatgaactgctggccacccgcgccagcctgcgcgaaagcgctggggtggtcgatcag
gacagcggcaccgatcaccaggccctgcgcgcgcggctggtcgaattgcagcagcgcctg
agccagttgcagggcgaagccccgctgatcctgccaaccgtcgattaccaggccgtggcc
tcggtggtggcggactggaccggcatcccggtcggacgcatggcgcgcaacgaggtcgag
accgtgctcaacctcgatagcctgctgggcaagcgcatcatcggccaggatcacgcgctg
aagatgatcgccaagcgcatccagacctcccgcgccggcctcgacaaccccaacaagccg
attggtgtgttcatgctcgccggcacctccggcgtcggtaagaccgagaccgcgctggcg
ctggccgaggcgctgtatggcggtgagcagaacctgatcaccatcaacatgagcgaattc
caggaggcgcacaccgtctccaccctcaagggtgcgccgcccggctatgtcggctacggc
gaaggcggcgtgctgaccgaggcggtgcgccgccggccgtacagtgtggtgctgctcgac
gaggtggaaaaggctcacccggacgtgcacgagatcttcttccaggtgttcgacaagggc
gtgatggaagacggcgaagggcgtctgatcgacttcaagaacaccctgatcctgctcacc
accaacgccggcaccgaacaggtggcgcgcctgtgccaggacgcggacaacctgcccgac
ccggaaagcatcgcccgcgacctgcgtcagccgctgctggagatcttcccgccggcgctg
ctcggccgtctggtgaccatcccctattacccactcagcgacaccatgctcaaggccatc
acccgcctgcagctggggcgcatcaagaagcgcatcgaaagcacccacaaggtgcccttc
gactacgacgaggcggtggtcgacctggtggtttcgcgctgcaccgagagcgagagtggc
ggccggcagatcgacgccattctcaccaacggcatgctgccggacatgagccgcgagttc
ctcacccgcatgatggaaggcaagccgctggccggtgtgcgcgtcagtgtggccgacaac
gacctgaactacagcttcgccgacaacgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

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