KEGG   Pseudomonas soli: O165_020640
Entry
O165_020640       CDS       T03276                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
pmos  Pseudomonas soli
Pathway
pmos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O165_020640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmos03019]
    O165_020640
Enzymes [BR:pmos01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     O165_020640
Messenger RNA biogenesis [BR:pmos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     O165_020640
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: AIN60582
UniProt: A0AA86KEK9
Position
4387753..4389642
AA seq 629 aa
MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL
ERLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMN
PQVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLAR
LPAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASHKRALL
AHLITLGAWEQVLVFTRTKHGANRLAEYLEKHGLTAAAIHGNKSQNARTKALADFKANTV
RVLVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISMVAPDEEKL
LKSIERVTRQKIPDGDLMGFDASQVEAEKPEVRERQPNNGRGGRNQQPRGEGGKEGSGGR
KDKGKDKGRNKPSSEKAAEKDKSSEKQQQGQQRKPRDQKPRQQQNNGQKAVPVAAPNRDP
EEFLDDDVDNFGNRADYVSPYQNAKNQGRNRRPGGNGGQAQGQRSGGGQGQGQGRGNGQQ
RQGQGSGEKRPRNGGGGNGGARRDNNGGRARREDSSRQEPAVRNPRESQSAPVIIRKESK
LDRYPTPEQLDDLPSRPRGERPALLTRKG
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgtcctttgcttccctcggtctctccgaggctcttgtccgcgctatcgaggctgcgggc
tatacccagcccactccggtgcaacagcgggccattcccgccgtgttgcaaggtcgcgac
ctgatggtcgccgcccagacaggtactggtaaaaccggcggcttcgcgcttccgatcctt
gagcgtctgttcccgggcggccatcccgacaagtctcaacgtcatggtccccgccaaccg
cgcgtgctggtgctgacgcccacccgtgagctggctgcccaggtacatgacagtttcaag
gtctatgcccgcgacctgaatttcatcagcgcctgcattttcggtggcgtcggcatgaac
ccgcaggtccaggccatggccaagggcgtcgacgtcctggtcgcctgcccaggtcgcctg
ctcgacctcgctggccagggcagtgtcgacctctcgcgggtcgagatcctggtgctggac
gaagccgaccgcatgctcgacatgggcttcatccatgacgtcaagaaagtgctggcgcgc
ctgccggccaagcgccagaacctgctgttctcggcaactttctccaaggacatcaccgac
ctcgccgacaaactgctgcacaaccccgagcgcatcgaggtcacgccgccgaacactacc
gtcgagcgtatcgagcaacgggtctaccgcctgccggccagccacaaacgcgccctgctg
gcgcacctgatcaccttgggcgcctgggaacaggtgctggtgttcacccgtaccaagcac
ggcgccaaccgcctggccgagtacctcgagaagcacggcctgaccgcggcggcaatccac
ggcaacaagagccagaatgcccgcaccaaggcgctggccgacttcaaggccaataccgtg
cgcgtgctggtcgccaccgacatcgccgctcgcggcctggacatcgaccaactgcctcat
gtggtcaacttcgagctgcccaatgtcgaggaagactacgttcaccgcatcggccgtacg
ggccgtgccggtcgctccggtgaagccatttcgatggtcgcgccggacgaagaaaagctg
ctcaagagcatcgagcgcgtcacccgccagaaaatcccggatggcgacctgatgggcttt
gacgcatcgcaggtcgaggccgagaagccggaagtgcgcgagcgccagccgaacaatggc
cgcggtggccgcaaccagcaacctcgcggcgaaggcggcaaggaaggcagtggcggacgc
aaggacaaaggcaaggacaagggccgcaacaagccttcgtccgagaaggccgcggaaaag
gacaagtctagcgagaaacagcagcaaggccagcagcgcaagccgcgcgaccagaagcca
cgtcagcagcagaacaacggccagaaagccgtgcctgtcgccgcacccaaccgtgaccct
gaggagttcctcgacgacgacgtcgacaacttcggcaaccgcgccgactacgtcagcccc
taccagaacgccaagaaccaggggcgcaatcgtcgcccgggcggcaacggcggccaagcc
caaggccagcgcagtggtggcggccaggggcaaggccagggtcgtggcaatggccagcag
cgccagggccagggctccggtgaaaagcgcccgcgcaacggcggcggcggcaatggtggc
gcccgacgcgacaacaacggcggccgtgcccgccgtgaagattcgtcccgccaggaaccg
gccgtgcgcaacccgcgcgagtcgcagagcgcgccagtgatcatccgcaaggaatccaag
ctggaccgttacccgacgcccgagcaactggacgacctgccaagccgcccacgcggtgaa
cgcccagcgctgctgacccgcaagggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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