KEGG   Paenibacillus mucilaginosus KNP414: KNP414_04131
Entry
KNP414_04131      CDS       T01550                                 
Name
(GenBank) DNA exonuclease
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pms  Paenibacillus mucilaginosus KNP414
Brite
KEGG Orthology (KO) [BR:pms00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pms03400]
    KNP414_04131
DNA repair and recombination proteins [BR:pms03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     KNP414_04131
    Archaeal homologous recombinant proteins
     KNP414_04131
SSDB
Motif
Pfam: SbcC_Walker_B SMC_N Rab5-bind DUF948
Other DBs
NCBI-ProteinID: AEI42663
UniProt: F8FFN6
Position
complement(4280915..4282768)
AA seq 617 aa
MLAAQLAAHLHEGEACPVCGAVEHPAPAGRGADGAGHAQAIEAWERLEFPLREKMTAAAR
QLMALQAAAEGLAALAESAALPEAAGLREAAAGTAPGAADDVPADPEAVRNGLQDAAEAL
TQLQKQTQELHGQLQQWTRESRETERLGQEFAARTASAQGLLDSAEARLRELTAARATTG
AGWEQRFPGIPVDGVTELAAQLQEKDRLAEDLRTRLDKSVTFLEEKGRRLEELQRQVAEA
EKTAVRLSAEQDALQRQTEQGAARLQEWVGGEDVSRLVREVQGELQRLRSAAQEAADALQ
TASAAHQDAARTEAAARQGEASAAAAVQELETEWLQLSQQEGFSSRDEVEAALIGAGEQE
QWAAEVEAHGKQEHQLTARAAEIDAELAGREVSEEAWQALSAELAACKQEDEACLQQRAR
AERDAEELQGKHRRWTELEEQRAACQEELTLLGKLQGVLRGNAFVEYLAEEQLMHVSRAA
SDRLGQLTRQKYAIEVDSGGGFVIRDDANGGVRRPVTTLSGGETFLTSLSLALALSTQIQ
LKGEHPLEFFFLDEGFGTLDGDLLDAVISALEKLHMDKLTVGVISHVPELRARLPRRLIV
HPAEPGGQGSRVQLETM
NT seq 1854 nt   +upstreamnt  +downstreamnt
gtgctggccgcgcagctggcggcgcacctgcatgaaggcgaggcctgcccggtctgcggc
gcggtggagcaccctgcgccagcgggccggggggcagacggagcagggcatgcgcaggct
atcgaggcctgggagcggctcgagttcccgctgcgcgagaagatgacggccgccgcccgg
cagctgatggctctacaggcggcggccgaaggcctggctgccctggcggagagcgctgcg
ctgccggaggccgcggggctgcgcgaggctgcggccggcacagcgcctggcgctgccgat
gatgtcccggcggacccggaagccgtccgcaatggacttcaggacgcggctgaagcgctc
acgcagctgcagaagcaaacgcaggagctccacggtcagctgcagcagtggacgcgggag
agccgggagacggagcgtctggggcaggagtttgcggcccggacggcttcggcacagggc
ctgctggacagcgcggaggcgaggctgcgcgagctgaccgcagcccgggcgactaccgga
gcgggctgggagcagcggttccccggcatccccgtagacggggtaacggagctggcggcg
cagctgcaggagaaggaccggctggccgaggatctgcgcacccggctggataagagcgtc
acgttcctcgaagagaagggacggcggctggaggagcttcagcggcaggtggccgaagcg
gagaaaacggcagtccggctgtcggcggagcaggacgcgctgcagcggcagaccgagcag
ggcgcagcccggctgcaggagtgggtcggcggagaggacgtcagccggctagtccgcgag
gtgcagggagaactgcagcggctgcgctccgccgctcaggaggctgctgatgcgctccaa
acggcttcggcggcgcaccaggatgcggcgcgtacggaagctgccgcccggcagggggaa
gcctctgccgctgcggctgtgcaggagctcgagacggagtggctccagctttcgcagcag
gagggcttctcgagccgggacgaggtcgaggcggccctgatcggcgccggcgagcaggag
cagtgggcggccgaagtggaggcccacggcaagcaggagcatcagctgacggcccgcgcg
gcggagatcgacgccgagcttgccgggcgcgaggtcagcgaagaagcctggcaggcgctg
tcggcggagctggcggcatgcaagcaggaggacgaagcctgcctgcagcagcgcgcccgc
gcggagcgggatgcggaggagctgcagggcaagcaccgccgctggaccgagctggaagag
cagcgtgccgcctgccaggaggagcttacgctgctcggcaagctccagggcgtgctccgc
ggcaacgcgttcgtcgagtaccttgcggaggagcagctgatgcacgtgtcgagagcggct
tcagaccggcttggtcagcttacacggcagaaatatgccatcgaggtcgactccggcggc
ggcttcgtcattcgcgacgacgccaacggcggggtccgccggccggtcaccacgctctcg
ggcggggagacgttcctgacgtcgctttcgctggcgctggcgctctccacccagatccag
ctcaaaggggagcatccgctcgagttcttcttcctcgacgaaggcttcggcaccctggac
ggtgacctgctggatgcggtcatctcggcgctcgagaagctgcatatggacaagctgacc
gtcggcgtcatctcccacgttcccgagctgcgcgcgcgtctgccgcgccggctcatcgtc
catccggcggagccgggagggcagggcagccgggttcagctcgaaaccatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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