KEGG   Podarcis muralis (common wall lizard): 114606141
Entry
114606141         CDS       T06059                                 
Symbol
TNPO1
Name
(RefSeq) transportin-1
  KO
K18752  transportin-1
Organism
pmua  Podarcis muralis (common wall lizard)
Pathway
pmua03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114606141 (TNPO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmua03019]
    114606141 (TNPO1)
   03009 Ribosome biogenesis [BR:pmua03009]
    114606141 (TNPO1)
Messenger RNA biogenesis [BR:pmua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114606141 (TNPO1)
Ribosome biogenesis [BR:pmua03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    114606141 (TNPO1)
  Pre-60S particles
    114606141 (TNPO1)
SSDB
Motif
Pfam: HEAT_EZ HEAT HEAT_2 Arm IBN_N Cnd1 Vac14_Fab1_bd Adaptin_N PDS5 CEP104-like_TOG MMS19_C Dopey_N UNC45-central RTP1_C1 DUF3689
Other DBs
NCBI-GeneID: 114606141
NCBI-ProteinID: XP_028603808
Position
11:complement(31602451..31637949)
AA seq 890 aa
MEYEWKPDEQGLQQILQLLKESQSPDTTTQRAVQQKLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASK
GELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDALDRPLNIMIPKFL
QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDGFIENLFALAGDEEPEVRKNVCRALV
MLLEVRMDRLLPHMISIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLCRHLTKL
IPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQQHEEDGIEEEEEE
EDELDDDDTISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
FISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMITVNPSGVVQDFIFFCDAVA
SWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPVPLKERLAAYYGV
NT seq 2673 nt   +upstreamnt  +downstreamnt
atggagtacgagtggaaacccgacgagcaggggctccagcagatcctgcagctgctcaag
gagtcgcagtccccggacaccaccacgcagagagccgtgcaacaaaaactggaacagctc
aatcagtatccagacttcaacaactacctgatatttgttcttacgaagctaaaatctgaa
gatgaacctacacggtcgttgagtggtctcatcttgaagaataatgtgaaagctcacttt
cacaattttcctaatggagtaactgatttcattaaaagcgagtgcttaaacaatattgga
gactcctccccgttaatcagagccactgtaggtatcctgattacaaccattgcctcaaaa
ggagaattgcagaattggcctgacctcttaccaaagctttgtagcctactagattctgaa
gactacaatacctgtgagggtgcatttggagctcttcagaagatttgtgaagattctgct
gaaatcttagatagcgatgcattagatcgccctctcaatatcatgatccctaagttttta
cagttcttcaagcatagcagtccaaagataaggtctcatgcagttgcatgtgtcaatcag
tttatcatcagtaggactcaggcccttatgttgcacattgatggatttattgagaatctg
tttgcgttggcgggcgatgaggagcctgaagtacgtaaaaatgtgtgtcgggctctggtg
atgctactggaagttcgaatggaccgcttacttcctcacatgattagtattgttgagtat
atgctacaaaggactcaggaccaagatgaaaatgtggctttggaggcttgtgagttttgg
ctgactttggctgaacagccaatttgtaaagatgttctgtgtcggcatcttaccaagttg
atacctgtgttagtaaatggcatgaaatactcagagatagatataattctcttgaaggga
gatgttgaagaagatgaagctatcccagatagtgagcaagatataaggccccgctttcac
cgttcacggacggtagcacagcagcatgaggaagatggcattgaagaggaggaagaggaa
gaggatgagctggatgacgatgatactatttctgactggaatttaaggaagtgttcagct
gctgctcttgatgtccttgccaatgtattccgcgatgaattgctgccacacattttgccc
cttctaaaagaactgctttttcatccagagtgggttgtgaaagaatcaggcatcctagtt
ctaggagcaattgctgaaggttgtatgcagggtatgattccatatcttcccgagctaatc
cctcaccttattcagtgcctctctgataaaaaggctcttgtgcgctccattacttgctgg
actcttagccgctatgcacactgggtagtcagtcaacccccagacacgtacttgaagcca
ttaatgactgagttgctaaagcgcatcctggatagcaacaagagagtacaagaagctgcc
tgcagtgcctttgctactctagaagaggaggcttgtacagaacttgttccttatctcgct
tatatacttgatactctggtcttcgcatttagtaaataccagcataagaatctgctcatt
ctttacgatgccataggaactttagcagattctgtaggccatcatctaaacaaaccagaa
tatattcagatgcttatgcctccattaatccagaaatggaacatgttgaaggatgaagat
aaagatcttttccctttattagagtgcctatcttcggttgccactgccttgcaatctggc
ttccttccatactgtgaacctgtgtaccagcgctgtgtaaatctggtacagaagactctt
gcacaagccatgttgcacaatgctcagccagaccagtacgaagctccagataaagacttc
atgattgtggctcttgatttacttagtggtttagctgaaggtctcggtggcaacattgaa
cagctagtggctcggagcaatatcctgacactcatgtaccagtgcatgcaggataaaatg
cccgaggtacgacagagttcttttgccttgctgggcgatctgacaaaggcatgttttcaa
catgtgaagccatgcattgctgacttcatgccaattttaggaaccaaccttaacccagag
ttcatttctgtctgtaacaacgccacgtgggcaattggagaaatttctattcagatgggt
atagagatgcagccttatattcctatggtcttgcaccagcttgtagaaatcattaacaga
cccaacacaccaaagactttgttagaaaacacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcccccatgctacagcagtttataagaccctggtgcacctct
ctcagaaacataagggataatgaagaaaaagattcagcattccgtggaatttgtaccatg
atcactgtcaatccaagtggagtagtccaagactttatatttttttgtgatgctgttgca
tcatggattagcccaaaagatgatcttcgagacatgttctgtaagatccttcatggattt
aaaaatcaagttggagatgaaaattggaggcgtttctctgaccagtttcctgttccctta
aaagaacgccttgcagcttactatggagtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (27)   

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