KEGG   Protobothrops mucrosquamatus (Taiwan habu): 107287194
Entry
107287194         CDS       T05763                                 
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
  KO
K12649  ATP-dependent RNA helicase DHX58 [EC:5.6.2.6]
Organism
pmur  Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:pmur00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    107287194 (DHX58)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:pmur04054]
    107287194 (DHX58)
Enzymes [BR:pmur01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     107287194 (DHX58)
Pattern recognition receptors [BR:pmur04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   107287194 (DHX58)
SSDB
Motif
Pfam: RIG-I_C-RD RIG-I_C ResIII DEAD Helicase_C SWI2_SNF2 ERCC3_RAD25_C AAA_19 Tmp39 Yippee-Mis18
Other DBs
NCBI-GeneID: 107287194
NCBI-ProteinID: XP_015671156
Position
Unknown
AA seq 677 aa
MELRDYQLEVIGPALEGKNIIIWLPTGAGKTRAAVYVCKKHLENQDKNKVVVLANTVPLV
DQHLKNEFSFLQSQFQITSVCGDSVQKLFFSDMVKSHDLIICTAQILYNALNNQEEEMHV
ELTDFSLLVIDECHHTHKGTVYNKIMEKYLDRKLKGLQDLPQILGLTASLGTGSANSLEA
AKDHILEICANLDAEKIMSTNKHNLSLNDHVPCPKKQYDLSEPRLQDPFGEKLRDIMAQI
YTYLNVPDITTNFGTKSFEQQIVELETKGAKECCQKTRVCALHLRKYNDALLTNETMRMI
DAFSMLDEFYQLEHATKKLTQKSEQYLFQLFDENRLSLLGLAKDSRYENPKLGKLQQVLQ
NQFQELKSSRGIVFTWTRQSAYSLHEWVLGNQALRELGIKSDVLTGAGSSSQTKHMTQQE
QQDVLHRFRKGQLNLLFSTSVAEEGLDIPECNIIIRYALMTNEIAMMQARGRARAPNSIC
SILAKTNSKEVARERLNETLETLMESAIKWVQEMPDKEYHLKITKLQHEGMISRKLRDIK
LEQQRLLHNPDSVRFCCLNCNVAVCHASDLRKIENMHHININSNFSLYYKKSPNCVTISR
EFKDWKPGSSISCDTCGQIWGMEMIYRDVTLPMLAIKNFVVETPDGRQKPKKWSKVTFEV
KAFDYTEYCNTNFKLDT
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggaactgcgtgattatcagttggaggttattgggcctgctttggaagggaagaatatc
atcatatggctgccaacaggagctgggaagacccgggcagccgtctatgtctgtaagaag
cacttggagaatcaagataaaaacaaagtggttgtgttagccaacacagtacctctggtt
gaccaacatctgaagaatgagttcagtttcttacaaagtcaattccaaattacatctgtt
tgtggtgatagtgtccagaagttattcttctcagacatggtaaagagccacgacttgata
atctgcacagcccaaatcctgtataatgcccttaacaaccaagaagaggaaatgcatgtg
gaactgactgatttctctctattggtgatagatgaatgtcaccacactcacaaaggaact
gtttataacaagattatggagaaatacttggaccgcaagctgaaaggtctacaggattta
cctcagattttgggactcacagcctctctaggtactggaagtgcaaattccctggaagca
gctaaggaccacatcctggagatctgtgctaacctggacgctgaaaaaattatgtcaacc
aataaacataatctctctcttaatgaccatgttccatgtcccaagaaacagtatgatctg
tcagaaccaaggttgcaggacccatttggagaaaaactcagggacataatggcccagatc
tatacttacctaaatgtacctgacattactacaaactttggtaccaagtcctttgagcag
caaattgtggagcttgaaacgaaaggagcaaaagaatgttgccaaaaaacccgagtttgt
gccctgcatcttcgaaaatacaacgacgccctgctgaccaatgaaaccatgcgcatgatt
gatgccttcagtatgctagatgagttttaccaactagaacatgctactaagaaattaaca
caaaaaagcgaacaatatctgtttcagctctttgatgagaacaggttgtctctcttgggc
cttgctaaagacagtcgctacgagaatcccaaacttggcaagctgcaacaagtcctgcaa
aaccaattccaagaactgaagagctcacggggcattgtcttcacctggacacgacagagt
gcctattcactgcatgagtgggtcctgggtaaccaggctttgcgtgaactggggatcaag
tctgatgttctaactggggctggttccagcagtcagacaaagcacatgacacagcaagaa
caacaagatgttctccatcgcttccgaaaggggcaactcaaccttcttttttccaccagt
gtggctgaggaggggctggacatccctgagtgtaatatcataatccgttacgcgctgatg
acaaatgaaattgctatgatgcaggccaggggccgtgcccgtgccccaaacagcatttgt
tccattttggccaagaccaacagcaaagaggtggcccgtgagaggcttaatgaaactttg
gagaccctgatggagagtgccataaaatgggtgcaggagatgcctgacaaagaataccac
ctaaagattacaaaattgcaacacgaaggcatgatcagcaggaaattgcgggatatcaaa
cttgagcagcagcgcctgctacacaatccagacagtgtacgtttctgctgcctcaattgc
aacgtggctgtctgccatgccagtgacttgcgcaaaatagagaatatgcaccacatcaac
attaattccaatttcagcctatattacaaaaagtcacccaattgtgtgacaatttcccgc
gaattcaaagactggaagccaggcagttccatcagctgcgatacatgtgggcagatttgg
ggaatggaaatgatctaccgggatgtcacacttccaatgttggccattaaaaattttgtg
gtggaaactccagatggccgccagaaacccaaaaaatggagcaaagttacttttgaagtc
aaggcttttgattatactgaatattgtaatactaattttaaactggatacataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

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