KEGG   Pseudomonas mendocina ymp: Pmen_0097
Entry
Pmen_0097         CDS       T00510                                 
Name
(GenBank) ATPase AAA-2 domain protein
  KO
K11907  type VI secretion system protein VasG
Organism
pmy  Pseudomonas mendocina ymp
Pathway
pmy02025  Biofilm formation - Pseudomonas aeruginosa
pmy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pmen_0097
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    Pmen_0097
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmy02044]
    Pmen_0097
Secretion system [BR:pmy02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pmen_0097
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_22 ClpB_D2-small AAA_16 NACHT nSTAND3 Sigma54_activat AAA_7 ResIII Clp_N ABC_tran_CTD AAA_25 AAA_24 DUF5947 FtsK_SpoIIIE T2SSE Hpr_kinase_C Acetyltransf_6 SLFN-g3_helicase AAA_6 DUF4407
Other DBs
NCBI-ProteinID: ABP82871
UniProt: A4XNF5
Position
92959..95559
AA seq 866 aa
MINVDLQQLVQALDAASKRDLEMAAERCVVRGGNKILVEDLLLGLLERPESLLARALQDA
EIDAGELAQALQPRGEHSESRNPVFSAELVQWLQDALLVANLELGASQIDQAALILALLR
NPMRYAGSRYQTLLSKLNAERLRDFALSQQPQAAGGKAAAPGESNLARFTHNFTQQARDG
KLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLALRIATGEVPQVLKGV
ELLCLDLGLLQAGASVKGEFERRLQGVIDEVKASPKPIILFIDEAHTLIGAGGQAGSGDA
ANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQLHEPTVDEAVTILRGLAP
VYEKSHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPEALERL
RGEIAEGERQGEAMRRDLDAGLSIDGEALDALETRLVAARAELEQVETRWAIQRDLAERL
LEQRKQCAAARLAGDAEETDEPRASLEELEAELRALQAELAAAQASERLVSFEVCPRLVA
EVISHWTGVPLSQLAREHNTKVITFADDLRQRVRGQEQAIQALDKAMRATAAGLNRPDAP
VGVFLLVGPSGVGKTETALALADLLYGGERFLTVINMSEFQEKHTVSRLIGAPPGYVGYG
EGGMLTEAVRQKPYSVILLDEVEKADPDVMNVFYQIFDKGVANDGEGREINFRNTLILMT
SNLASERIASLCAGGERPGAEDLELAIRPQLTQHFKPALLGRMRVVPYYPMDGDLLRQLV
GLKLARFGERLARRQLAFSHCDGLVEHLAERCTHGDSGARLIDHLIDQHLQPLVVDRLLD
AMASGETLQQVRATLNGEGTVVCEFA
NT seq 2601 nt   +upstreamnt  +downstreamnt
atgatcaacgtcgacctgcaacaactggttcaagctctggacgccgcgagcaagcgcgac
ctggagatggccgccgaacgctgcgtggtacgcggcggcaacaagatcctcgtcgaggac
ctgctgctgggtctgctcgagcgcccggaaagcctgctggcgcgtgccctgcaggatgcc
gagatcgatgccggcgagctggcccaggcgctgcagccgcgcggcgagcacagcgagtcg
cgcaacccggtgttttctgccgaactggtgcagtggctgcaggacgccctgctggtggcc
aacctggagctgggcgccagccagatcgaccaggccgcgctgatcctcgccctgctgcgc
aaccccatgcgctacgccggcagccgttatcagacgctgctgagcaagctcaatgccgag
cgtctgcgcgacttcgcccttagccagcagccgcaggccgcgggcggcaaagcggcggcg
ccgggcgagtcgaacctggcgcgctttacccacaacttcacccagcaggcccgcgacggc
aagctcgatccggtgctgtgccgcgacggcgcgatccgccagatggtcgatatcctcgcc
cgccggcgcaagaacaaccccatcgtggtcggcgaggccggggtgggcaagaccgccatc
gtcgagggcctggccctgcgcatcgccaccggcgaggtaccgcaggtgctcaagggcgtc
gagctgctgtgcctggacctcggcctgctgcaggccggcgccagcgtcaagggcgagttc
gagcgccgcttgcagggcgtgatcgacgaggtcaaggcctcgcccaagccgatcatcctg
tttatcgacgaggcccatacgctgatcggggccggtggccaggccggcagcggcgatgcc
gccaacctgctcaagccggcgctggcccgtggcgagctgcgcaccatcgccgccaccacc
tggagcgaatacaagaagtacttcgagaaggacccggcgctggcccgtcgcttccagccg
gtgcaactgcacgagccgaccgtcgacgaggcggtgaccatcctgcgcggcctggcgccg
gtgtacgagaagagccacggcatctacctgcgcgacgacgccgtggtcgccgccgccgag
ctgtcggcgcgctacctggccggtcgccagttgccggacaaggcggtggacgtactcgac
accgcctgcgcccgcgtgcgcatcagcctggccgccgcacccgaggcgctggagcgcctg
cgcggcgagatcgccgagggcgagcgccagggcgaggccatgcgccgcgacctggacgct
ggcctgagcatcgacggcgaagcgctggatgccctggaaacccgcctggtcgccgcgcgc
gccgaactggagcaggtggaaacccgctgggcgatccagcgcgacctggccgagcgcctg
ctcgagcagcgcaagcagtgcgccgcggcgcgtcttgctggcgacgcagaggaaaccgac
gagccacgtgccagcctggaggaactggaagccgagctgcgcgccctccaggccgagctg
gccgcggctcaggccagcgagcgcctggtcagcttcgaggtctgcccgcgcctggtggcc
gaggtgatcagccactggaccggcgtgccgctgagccagctggcgcgcgagcacaacacc
aaggtcatcaccttcgccgacgacctgcgccagcgcgtgcgcggccaggagcaggcgatc
caggcgctggacaaggccatgcgcgccaccgctgccggcctcaaccggcccgatgcgcca
gtgggcgtgttcctcctggtcggccccagcggcgtcggcaagaccgagaccgccctggcc
ctggccgacctgctgtatggcggtgaacgcttcctcaccgtgatcaacatgtccgagttc
caggaaaaacataccgtctcgcgtctgatcggcgcgccgcccggctacgtcggctacggc
gaaggcggcatgctcaccgaagccgtgcggcagaagccctactcggtgatcctcctcgac
gaggtggagaaggccgaccccgacgtgatgaacgtcttctaccagatcttcgacaagggc
gtggccaacgacggcgaagggcgcgagatcaacttccgcaacaccctgatcctgatgacc
agcaacctggccagcgaacgcatcgccagcctgtgcgccggtggtgagcgcccgggggcc
gaggacctggagctggccatccgcccgcaactgacccagcacttcaagccggccctgctc
ggccgtatgcgcgtggtgccctactaccccatggacggcgacctgctgcgccagctggtc
ggcctcaagctggcccgtttcggcgagcgcctggcccgtcgccagctcgccttcagccac
tgcgacggcctggtcgagcacctggccgagcgctgtacccatggcgacagcggcgcccgt
ctgatcgaccacctgatcgaccagcacctgcagccgctggtggtcgaccgcctgctcgac
gccatggcgagcggcgagaccttgcagcaggtacgcgccaccctgaacggtgaaggaacg
gtggtctgtgagttcgcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (33)   

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