KEGG   Pongo abelii (Sumatran orangutan): 100438007
Entry
100438007         CDS       T01416                                 
Symbol
TRIM4
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM4 isoform X1
  KO
K11998  tripartite motif-containing protein 4 [EC:2.3.2.27]
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pon04121]
    100438007 (TRIM4)
Enzymes [BR:pon01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100438007 (TRIM4)
Ubiquitin system [BR:pon04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100438007 (TRIM4)
SSDB
Motif
Pfam: zf-C3HC4_4 SPRY zf-RING_UBOX zf-C3HC4 zf-B_box zf-C3HC4_2 zf-C3HC4_3 PRY zf-RING_2 zf-RING_5 zf-Nse zf-RING_6 Sina_RING zf-RING_10
Other DBs
NCBI-GeneID: 100438007
NCBI-ProteinID: XP_024106086
Ensembl: ENSPPYG00000017391
Position
7:complement(3285464..3315620)
AA seq 474 aa
MEAEDLQEELTCPICLDYFQDPVSIECGHNFCRGCLHRSWASGGGPFPCPECRHPSAPAA
LRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQTHAM
APIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMRISTEFSKL
HNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEVGEKSQASTLGLLQ
NPKEVLTRSEIQDVNYSLEAVKVKTVCQIPLMKEMLKRFQVAVNLAEDTAHPKLVFSQEG
RYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFVERFQHLPCVLGKNVFTSGKHYWEVES
RDSLEVAVGVCREDVMGITDRSKMSPDEGIWAIYWSAAGYWPLIGFPGTPTQQEPALHRV
GVYLDRGTGNVSFYSAVDGVHLHTFSCSSVSRLRPFFWLSPLASLVIPPVTDRK
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggaagctgaggacctccaggaggagttgacctgccccatctgcctggactatttccag
gacccggtgtccatcgagtgcggccacaacttctgccgcggttgcctgcaccgcagctgg
gcgtcgggcggcggcccgttcccctgccccgaatgtcggcacccatcggcgcccgccgcg
ctgcgacccaactgggccctggccaggctgacagagaagacgcagcgccggcgcctgggc
cccgtgcccccgggcctgtgcggccgccactgggagccgctgcggctcttctgcgaggac
gaccagcggcccgtgtgcctggtgtgcagggagtctcaggagcaccagactcacgccatg
gcacccatcgacgaggccttcgagagctaccgggagaaacttcttaagtctcagcgtaat
ctcgtggccaagatgaagaaagtcatgcatttacaggatgtagaagtgaagaacgccaca
cagtggaaggataagataaagagtcagcgaatgagaatcagcacggagttttcaaagctg
cacaacttcctggttgaagaagaggacctgtttcttcagagattgaacaaagaagaagaa
gagacaaagaagaagctgaatgagaacacgttaaaactcaatcaaacgatcgcttcattg
aagaagctcatcttagaggttggggagaagagccaggcctccaccctggggctgcttcag
aatccaaaagaagtgttgaccaggagtgagatccaggatgtgaactattcccttgaagct
gtaaaggtgaagacagtgtgccagatacccttgatgaaggaaatgctaaagcgattccaa
gtggctgtaaacctagctgaagacacagctcatcccaaactcgtcttctcccaggaaggg
agatatgtgaaaaatacagcatcagccagttcttggccagtgttttcttcagcatggaac
tactttgctggatggaggaatcctcagaagactgcttttgtagagagatttcagcactta
ccctgtgttctgggaaaaaacgttttcacctcagggaaacattactgggaagttgagagt
agagatagtctggaggttgccgttggggtgtgtcgggaggacgtcatgggaattactgat
cgttcaaaaatgtccccagatgagggcatctgggcgatttattggagtgctgctggctat
tggcccttgataggcttccctggaactcccacccagcaagagccagctctccaccgagtg
ggggtttacctggatcgtgggactgggaatgtctccttctacagcgctgtggacggagtg
cacctgcacaccttttcttgttcttctgtctcacgcctccggccatttttttggttgagt
ccattagcatctttagtcattccaccagtgactgataggaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (14)   
   Pfam (14)   
All databases (30)   

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