KEGG   Paralichthys olivaceus (Japanese flounder): 109625958
Entry
109625958         CDS       T06037                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
  KO
K14810  ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:pov00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pov03009]
    109625958
Enzymes [BR:pov01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     109625958
Ribosome biogenesis [BR:pov03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    109625958
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-GeneID: 109625958
NCBI-ProteinID: XP_019937139
Position
Unknown
AA seq 544 aa
MIQAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPVIQRILASKQSVR
EQDVRALILVPTKELGRQVQTMMRQLTAFCSRDVRVADISGKADLSSQRPILMEKPDVVV
GTPSRVLAHLSAQNLALHSSLEMLVVDEADLLFSFGFEADLKNLLCHLPKIYQSFLMSAT
LTEDVQALKELLLHNPVILKLQGSQLPDSSQLQQYSIKCEEEDKFLLIYTLLKLRLVQGK
TLVFVGAVDRCYRLKLFLEQFSIPACVLNSELPVQSRCHIITQFNQGFYDYIIATDEQSL
ADPSAAPQTSAGKGKKKKTTERKGKGKDKEYGVSRGVDFQNVANVINFDFPTTVESYIHR
VGRTARADNPGSALSFISHAELALLSEVEEALTGDNADSVLKPYEFKMEEIEGFRYRCRD
AMRSVTKQAVKEARLKEIKQELLNSEKLKTYFEDNPRDLQLLRHDKDLHPAVVKPHLKNI
PEYLIPETLRGVVNPLSSKRRRKRKSKPDGVVKTSFKKNSKGTNPLKTFRYSGGRGRKGK
AGQS
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgatccaggcggttgcagatctgggttggtcccagccgaccctgattcaagagaaggcc
attcctctggctctggaggggaaagaccttctggctcgagcccggacaggatctggaaag
acggctgcgtacgccattcctgtcatacaacgcatcctggcgtccaaacagagtgttcgt
gagcaggacgtgagggctctgatcctggttccaaccaaagagctgggtcggcaggttcag
accatgatgagacagctgacggcgttctgctcgagggacgtgcgggtggctgacatctct
gggaaggctgatctgtcatcgcagagacctatcttaatggaaaagcctgatgtggtagtg
gggacgccgtcccgcgtgctggcccacctcagcgcccagaatctggccctgcattcatcg
cttgagatgctggtggtggacgaggccgacttgctcttctcttttgggttcgaggcagac
ctgaagaacctgctgtgtcatttgccgaagatctaccagtcgttcctgatgtctgctact
ctcaccgaggacgttcaggccttgaaggagctgctgctacacaaccctgtgatcttgaag
cttcagggctctcagctcccggacagcagccagctgcagcagtacagcatcaaatgtgag
gaggaggacaagttcctgctcatctacacgctgctgaagctgcgactggttcagggaaag
acgctggtgtttgtgggagcagtggacagatgctacagactgaagctgttcctggaacag
ttcagtattcctgcctgtgtgctcaactctgagctgcccgttcagtccaggtgtcacatc
atcacccagtttaaccagggattttatgactacatcatcgccacagatgaacagagtttg
gccgatccctctgcagctccccagacgagtgcgggcaaagggaaaaagaaaaagaccaca
gagagaaaaggaaagggcaaggacaaggagtatggagtctccagaggtgtggatttccaa
aatgttgccaatgtcatcaactttgatttcccaacgactgtagagtcctacatccatcga
gttggcagaacggcgagagcagacaacccaggcagcgctctgtcgttcatctcacacgct
gagctcgccttgctgtcagaggtggaggaggctctgacaggagataatgctgattctgtt
ctgaaaccttacgagtttaagatggaagagattgaaggcttcaggtacaggtgcagggac
gccatgcgttcagtgacgaaacaggcggtgaaggaggccaggctgaaagagatcaaacag
gagctgctcaattcagaaaaactcaagacatatttcgaggataaccccagagatctgcag
ctgctcagacatgacaaagacctccatcctgctgtcgtcaaaccgcacctgaagaacata
cctgagtacctcattcccgagacactgaggggtgtggtgaatccgctgtccagcaagagg
aggaggaagaggaaatctaaacctgatggagtcgtcaagaccagtttcaagaagaacagc
aaggggacgaacccactgaagactttcagatacagtggagggagaggcaggaaaggcaaa
gcgggccagtcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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