KEGG   Paralichthys olivaceus (Japanese flounder): 109632586
Entry
109632586         CDS       T06037                                 
Symbol
psmc1
Name
(RefSeq) 26S protease regulatory subunit 4
  KO
K03062  26S proteasome regulatory subunit T2
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03050  Proteasome
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    109632586 (psmc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pov03051]
    109632586 (psmc1)
Proteasome [BR:pov03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     109632586 (psmc1)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_2 AAA_22 nSTAND3 DUF815 AAA_5 RuvB_N AAA_16 AAA_25 AAA_28 AAA_14 AAA_3 RNA_helicase ATPase IstB_IS21 TIP49 AAA_11 AAA_18 Mg_chelatase Prot_ATP_ID_OB_N NB-ARC AAA_33 Parvo_NS1 AAA_7 PhoH NACHT AAA_24 AAA_30 TsaE
Other DBs
NCBI-GeneID: 109632586
NCBI-ProteinID: XP_019947510
Position
Unknown
AA seq 440 aa
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKRKKKTKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgggtcaaagccagagtggaggccacggtccaggaggaggcaagaaggatgacaaggat
aagaaaaagaagtatgagcctccaattcccaccagagttggtaagagaaagaagaagacc
aagggaccagatgctgccagcaaactaccactggtcacccctcacactcaatgccgcctg
aagctgctgaaacaggagcgtatcaaagactacctactgatggaggaggagttcatcagg
aaccaggagcagatgaaacccctggaagagaagcaggaggaggagaggtcaaaggtggat
gacctgagagggacacccatgtctgtcggcaccctggaggaaatcatcgatgacaaccac
gcaattgtttccacctcagtaggatcagagcattacgtcagtatcctgtcttttgtggat
aaagatttgttggagccgggctgctctgtcctgctcaaccacaaggttcatgctgtgatt
ggggtgctgatggacgacaccgatcccctggtaacagtcatgaaggtggagaaggcccca
caagaaacgtacgctgacattggaggactggacaatcagatccaggagatcaaggagtca
gtggagctgcctcttacacatccagagtattatgaagagatgggcattaagcctcccaaa
ggcgtcatcctatatggaccacctggcacaggtaaaacactgctcgccaaggccgtggct
aatcagacatcagccacgtttctgcgcgtggtgggctcagagctgatccagaagtacctg
ggagatggacccaagctggtccgagagctcttcagggtggcagaggaacatgccccctcc
atcgtcttcatcgacgagatcgacgccatcggcaccaagaggtacgactccaactctgga
ggcgagcgggagatccagaggaccatgctcgagctgctcaaccagcttgacggcttcgac
tcgcgtggagacgtgaaagttatcatggccaccaaccggatagagaccctggatccagca
ctcatcagacctgggagaatcgaccgtaagatcgagtttccactgccggacgagaagacc
aagaggaggatcttccagatccacaccagccgcatgacagtcgcagatgatgtcaccctt
gatgacctcatcctggctaaggatgacctatcaggagcagacatcaaggccatctgcaca
gaagccggcctcatggctttgcgagagcgccgcatgaaagtcaccaacgaggacttcaag
aaatccaaggagaacgtcctgtacaagaagcaggagggaacaccagaggggctttacctc
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (40)   

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