KEGG   Pectobacterium parmentieri RNS08.42.1A: A8F97_22400
Entry
A8F97_22400       CDS       T04513                                 
Name
(GenBank) RNA polymerase-binding ATPase
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ppar  Pectobacterium parmentieri RNS08.42.1A
Brite
KEGG Orthology (KO) [BR:ppar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppar03021]
    A8F97_22400
Transcription machinery [BR:ppar03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     A8F97_22400
SSDB
Motif
Pfam: RapA_C Tudor_RapA Tudor_1_RapA SNF2-rel_dom Helicase_C ResIII DEAD AAA_34 Allexi_40kDa
Other DBs
NCBI-ProteinID: AOR61609
UniProt: A0A8B3FE63
Position
complement(4924228..4927131)
AA seq 967 aa
MPFTLGQRWISDTESELGLGTVVAVDTRMITLLFPASGENRLYSRSDAPITRVMFNPGDT
VTSHEGWQLKVDDVREEKGLLVYCGQRLDDETQAELREVFLDSKLTFNKPQDRLFAGQID
RMDRFALRYRARKHQNEQALQQWGGLRGMRASLIPHQLHIAHEVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRANRVLIIVPETLQHQWLVEMLRRFNLLFSLFDDERYAEAKLD
SSNPFETEQLVICSLGFVQRSAQRFAQLVNADWDLLVVDEAHHLVWSEESPSPEYQAIEA
LARATPAVLLLTATPEQLGQQSHFARLRLLDPNRFHDYQEFVAEQQQYRPVADAVTLLLA
GETAQTAELNALSDLLGEQDIEPLLKSINSDSDDNQKARQELITMLMDRHGTSRVLFRNT
RQGVKGFPQRILHQIRLPLPSQYQTAIKVSGIMNANKPLETRARDMLYPEQIYQQLEGDD
ATWWNFDPRVEWLLNYLTANRDEKVLVICAQAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFASEEEGAQVLICSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRIG
QAKEIQVLVPYLENTAQAMLVRWYHEGLDAFEHTCPTGRTIYDAHHTQLIERLTTVGEQQ
GLDEFIHTCRQQHDSLKQQLEQGRDRLLEMHSNGGEQAQLLAQAIAEQDNDVNLVTFALN
LFDIVGINQEDRSDNLIILTPSDHMLVPDFPGLPQDGCTITFDRDQALSREDAQFISWEH
PLIRNGLDLVLSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTPV
RLLMDRKGTDLAAQVEFESFNRQLNAVNRHTSSKLVNAVQSDVHAMLQQAEALVETQARQ
LITEAQQQADLQLRRELERLEALKAVNPNIREDELTALENQREQVLSNLHEANWRLDAIR
LVVVTHQ
NT seq 2904 nt   +upstreamnt  +downstreamnt
atgccttttacacttggtcagcgctggatcagcgatacagaaagcgaacttggactggga
acggttgttgccgtcgatacgcgtatgataacgctgcttttccctgccagcggtgaaaac
cgactttattcccgcagcgatgcccccatcacccgcgtgatgttcaaccccggcgacacc
gttaccagccatgaaggttggcagctcaaggttgatgacgtgcgggaagaaaaagggttg
ctggtgtattgcggccaacgcctggacgatgaaacgcaggcagaactgcgtgaagtcttt
ttagacagcaagctcacgttcaacaaaccgcaagatcgcctgttcgccggacagattgat
cgtatggatcgctttgctctgcgctatcgcgcccgcaagcaccagaacgagcaggcactg
caacaatggggcggtttgcgcggcatgcgtgccagcctcatcccccatcagcttcacatc
gctcatgaagttggccaacgccatgcgccacgtgttttgctggcggacgaagtcggtctg
gggaaaaccattgaagccggaatgatcatccaccagcaactgctggcgggtcgtgccaat
cgcgtgctgattatcgtaccggaaaccctgcaacatcagtggctggtcgaaatgctgcgc
cgctttaacctgctgttctcactgtttgacgacgagcgctatgccgaagccaagctggac
agcagcaatccgtttgaaactgaacagttggtgatctgctcactgggatttgttcaacgc
agtgcccagcgttttgcacagttggtcaacgccgactgggacctgctggtggtggatgaa
gcccaccatctggtttggagcgaagagagccccagcccggaataccaggctattgaagct
ctggctcgcgcgacccctgccgttctgctattaaccgcaacgccggaacagcttgggcag
cagagccactttgcgcgcttacgcctactcgatcccaaccgtttccacgactatcaggaa
ttcgttgccgaacagcagcagtaccgtccagtcgccgatgccgtcactctgctattagcg
ggtgaaaccgctcagacggctgagctaaatgcgctgagcgatcttctgggtgaacaggac
attgagccgttgctgaaatccatcaacagcgacagcgacgacaaccagaaagcacgtcag
gaactgatcaccatgctgatggatcgccacggcaccagccgtgtgctgtttcgcaatacg
cgtcagggcgttaaaggcttcccgcagcgtatcctgcatcaaatccgtctgccgctgccg
tcgcagtaccaaaccgccattaaagtttccggcattatgaacgcgaataagccgttggaa
acacgcgcccgcgatatgctgtatccagaacaaatttatcaacagctcgaaggggacgat
gcaacctggtggaacttcgatccgcgtgtcgaatggttgctgaactacctgactgccaat
cgtgatgaaaaagtgctggtaatctgtgctcaggccgccacagcgctacagttggagcag
gtgctgcgcacgcgtgaagcgattcgcgccgccgtcttccatgagggattgtctattctg
gaacgtgaccgcgccgccgcctatttcgcttccgaagaagaaggcgcacaggtgctgatc
tgttcagagatcggctcagaaggccgtaatttccagtttgccagccatctagtgatgttc
gatctgccgttcaaccccgacctgctggaacagcgtattggtcgtctggatcgtatcggg
caagcaaaagaaattcaggttctggtgccgtatctggaaaatactgcacaggccatgttg
gtacgctggtatcacgaagggctggatgcgtttgaacacacctgcccgacaggtcgcact
atctatgatgcacaccatacgcagttgattgagcgactgacgaccgtcggcgagcagcag
ggattggatgaatttatccatacttgccgtcagcagcacgacagcctgaagcaacagctt
gaacaaggccgcgatcgtctgctggaaatgcattctaacggtggcgagcaggctcagttg
ctggcacaggccattgcagaacaggataatgacgtcaatctggtgacatttgccctgaac
ctgtttgatattgttggcatcaatcaggaagatcgcagcgataacctgatcatactgacg
ccatccgatcatatgctggtgccggatttcccaggtttgccgcaggacggctgtacgatc
accttcgatcgcgatcaggcgctttcccgcgaagatgcacagtttatcagttgggaacac
ccgctcatccgtaacgggctcgatctggtgctgtccggcgataccggaagctgtgcggtt
tccttgctgaaaaataaagcgctaccagtcggcacactgctggctgagctagtttacgtt
gtggaagctcaggcaccaaaacacctgcaactgacccgtttcctaccgccaacaccggtt
cgcctgctgatggatcgtaaaggcacggatctggcggcacaggttgagtttgagagcttc
aaccgccagctcaacgcggtaaaccgccatacgtccagcaagctggtgaatgcggtgcaa
tccgatgttcatgccatgctgcaacaggcagaagcattggtggaaacgcaggcgcgtcag
cttatcaccgaagcgcaacagcaggccgatctgcaactgcgccgcgagttggaacgtttg
gaagcactgaaagccgtcaaccctaacattcgtgaagacgaactgaccgcgctggaaaat
cagcgcgagcaggtgttaagcaacctgcacgaagccaactggcgtctggatgcgatccgt
ctggtcgtggtgacgcaccagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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