KEGG   Prunus persica (peach): 18784353
Entry
18784353          CDS       T03092                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
pper  Prunus persica (peach)
Pathway
pper03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    18784353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pper03019]
    18784353
Enzymes [BR:pper01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     18784353
Messenger RNA biogenesis [BR:pper03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     18784353
SSDB
Motif
Pfam: CLP1_P CLP1_N Clp1 nSTAND3 CbiA AAA_22 AAA_24 ABC_tran ATP_bind_1 AAA_29 FtsK_SpoIIIE MMR_HSR1 GTP_EFTU SRPRB T2SSE
Other DBs
NCBI-GeneID: 18784353
NCBI-ProteinID: XP_007215421
UniProt: M5XC03
Position
G3:complement(25250509..25253738)
AA seq 429 aa
MAQGGGAKQVKLERESELRIEVGNDAPLKLRLLNGTAEIFGTELPPEIWLTFPPRLKFAV
FTWYGATIEMDGSTETDYTADETPNISYVNVHAVLEERRNRAKASPPEDSNSSQPQGPRV
IVVGPTDSGKSTLSKMLLSWAAKQGWKPTFVDLDIGQGAITIPGCIAATPIEMPIDPVEG
IPLEIPLVYFYGHTTPSNNVDLYKVLVKELAQVIERQFSANAESRAAGMVINTMGWIEGQ
GYELLLHAIDTFDANVVLVLGQEKLCSMLRDVLKNKPGVDVVKLQRSGGVVSRNAKFRQK
SRSHRIREYFYGLANDLSPHSNIANFSDLSVFRIGGGPQAPRSALPIGAEPAADPTRLVP
VNINRDLLQTVLAVSFAKDPDQIISSNVAGFIYITDIDLHRKTITYLAPSAGDLPSKYLI
AGNLPWLET
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggcgcaaggaggtggagcaaagcaggtgaaattggaacgagagagcgaacttagaatc
gaagtgggcaacgacgcgcctctcaagcttcggctgctcaatggcacagccgagatcttt
ggcaccgagctcccccctgaaatctggctcaccttcccacccaggctcaagtttgctgtt
tttacttggtatggagcaacaattgagatggacggcagtacggaaaccgattacaccgct
gatgagaccccaaacatcagttatgtaaatgtgcatgccgtactggaagaacggagaaac
cgtgctaaagcctcgccgcctgaagactccaattcttctcagcctcagggcccgagggtg
attgttgtgggacctacagattctgggaaaagtaccttgtccaaaatgcttcttagttgg
gcagctaagcagggatggaagcctacttttgtcgacttggatattggacaaggagctata
acaattcccggatgcattgccgctactcctattgaaatgcctattgatccggttgaagga
attcctcttgaaattccccttgtttatttctatgggcacacaactcctagtaacaatgta
gatttatacaaagtacttgtgaaggagcttgctcaagtgatagagagacaattttctgct
aatgctgaatctcgagctgctggaatggtgatcaacactatgggatggatagaaggtcaa
ggctatgagttgcttcttcatgcaattgatacattcgatgccaatgttgtcttagttttg
ggacaggaaaagctttgcagcatgctcagagatgtactaaagaacaagcccggtgtggac
gttgttaaacttcaaagatcagggggtgttgtatccaggaatgcgaaattccgtcaaaaa
tccaggagtcataggataagggaatatttttatggccttgcaaatgatctgagcccgcat
tctaatatagcaaatttcagtgatttatctgtctttcgaattggtggtgggccacaggcc
ccacgttcagctttgccaattggtgcagagcctgccgcagatcctacaagattggtgcct
gtgaatattaacagggatttgctccagacggttcttgctgtttcattcgccaaggatcct
gatcaaattatttctagtaatgttgctgggtttatttatatcacagacattgatcttcac
aggaagacaattacatatcttgcaccatctgcgggcgatcttccaagcaaatatttgatt
gcaggaaacttgccatggcttgaaacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (28)   

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