KEGG   Photobacterium profundum: PBPRA0091
Entry
PBPRA0091         CDS       T00173                                 
Symbol
S3908
Name
(GenBank) putative ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
ppr  Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:ppr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppr03400]
    PBPRA0091 (S3908)
Enzymes [BR:ppr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PBPRA0091 (S3908)
DNA repair and recombination proteins [BR:ppr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PBPRA0091 (S3908)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 PhoH ResIII
Other DBs
NCBI-ProteinID: CAG18536
UniProt: Q6LVY9
Position
1:94145..96166
AA seq 673 aa
MKLNSRQTEAVKYISGPCLVLAGAGSGKTRVITNKIAYLVQHCDYKARNIAALTFTNKAA
REMKERVGKTLGKKEAKGLMVSTFHTLGLNIIRREYKALGLKANFSLFDDQDQMALLKEL
TEAELDGDKDLLKLLQSAISNWKNEMLSAAEAQAYAQSERDQLFAHCYELYQRQMKAYNA
LDFDDLILLPVLLLRDDQEMRQRWQNKIRYLLVDEYQDTNTSQYLFVKLLVGERSRFTVV
GDDDQSVYSWRGAQPENLGLLQKDFPSLRVIKLEQNYRSTSRILRTANILIANNPHLFEK
TLFSEIPDGEMLKVITAKNEDHEAEKVIGELIAHRFLNNTGYKDYSILYRGNHQSRLFEK
SLMQNRIPYKISGGTSFFSRSEIKDIMAYLRLLTNLDDDNAFLRIVNTPRREIGPVTLEK
LGTYANMRGKSLFASSFELGLEQHLAGRGLENLQRFTRWIVEMSENIERGDSVAALRELV
RDIHYEDWLYESSPSPKAAEMRMKNVSQLYSWVTADLEGDNYDNEVKTLKEIVQRLTLRD
MMERGEDDDEADQVQLMTLHASKGLEFPYVYLVGAEEGILPHQTSVDEGNVEEERRLAYV
GITRAQKELTFTLCKERRQYGELIKPEPSRFLYELPQDDLQWEVEKRPVTQQERMQKGQS
HIANLRAAMFKKN
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgaaactgaactcaaggcaaacagaagcagtgaaatacatatctgggccatgtcttgtt
ctagctggggcgggatcaggtaaaactcgtgtaatcactaataaaattgcgtacttagtt
cagcattgtgactataaagctcgcaacatcgctgctttaacctttaccaataaagccgca
cgtgaaatgaaagagcgtgttgggaaaaccttgggcaagaaagaagctaaaggtttgatg
gtatcaacatttcacactctagggctaaatattattcgtcgtgaatataaagctcttggt
ctgaaagccaatttttcgttgtttgatgatcaagaccaaatggctttgttaaaagaatta
acagaagctgaattagacggcgataaagatctgttaaagctattacaatctgcaatttcc
aattggaaaaatgagatgttgtcggctgcagaagcacaagcttatgcccaatcagagcgt
gatcagctatttgcccattgctacgaattatatcagcgacaaatgaaagcgtataatgcc
ctggattttgatgatttaattttattaccggtattgctgctacgtgacgatcaagaaatg
cgtcagcgttggcaaaataaaattcgttacttactggtcgacgaataccaagataccaat
accagccagtatttatttgtgaaactgttagtaggcgagcgttctcgttttactgtggtc
ggtgatgatgatcagtcggtgtattcatggcgtggtgctcagccagagaacttgggatta
ttgcagaaagactttcctagtttgcgtgtgataaagctcgaacaaaattaccgctcaacc
agccggattttacgtacagccaatatattgattgctaacaatccacacttgtttgaaaaa
acacttttttctgaaatacccgacggcgaaatgctgaaagtgatcacggcaaaaaatgaa
gatcatgaggccgaaaaggttatcggtgaattgattgcgcaccgtttcttgaacaatacg
gggtataaagattattcgattttataccgtggtaaccaccagtcacgtttgttcgaaaag
tcattaatgcaaaaccgaattccatataaaatttccggtggcacatcatttttctctcga
tctgaaattaaagatatcatggcgtatcttcgtttattaaccaatcttgatgatgataat
gctttcttacgtatcgtgaatacgccacgccgcgaaatcggccctgtaacgttagaaaag
ctgggtacttacgccaatatgcgtgggaaaagcttatttgcttccagctttgagcttggg
ttagagcaacacttagcggggcgtggattagagaacttacagcggtttactcgctggatt
gttgaaatgtctgagaatattgaacggggtgattctgtcgcagctcttcgtgaattagtg
cgtgatattcattatgaagattggttgtatgaaagttccccaagccctaaagcggcagag
atgcgaatgaaaaacgtgtctcagttgtatagctgggtgaccgcggatttagaaggtgat
aactatgacaatgaagttaagacgttaaaagagatcgttcagcgtttaacgctacgagat
atgatggagcgtggtgaagatgatgatgaagctgatcaagtacaattaatgacgctccat
gcttctaaaggtttggaattcccctatgtgtaccttgtcggcgcggaggaggggatttta
cctcatcaaaccagtgttgatgaaggtaacgtagaggaagagcgtcgtttagcttatgtt
ggcattacgcgggctcaaaaagagttaacgtttaccttgtgtaaagagcgtcggcaatac
ggggagttgataaaaccggaaccaagccgtttcttgtatgagttaccacaagatgatttg
cagtgggaggttgaaaagcggcctgtcacccaacaagagcgaatgcaaaaagggcaatca
catattgctaacttgcgggctgccatgtttaagaagaattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

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