KEGG   Pseudodesulfovibrio profundus: DPRO_3048
Entry
DPRO_3048         CDS       T05258                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
pprf  Pseudodesulfovibrio profundus
Pathway
pprf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pprf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DPRO_3048
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprf03019]
    DPRO_3048
   03009 Ribosome biogenesis [BR:pprf03009]
    DPRO_3048
Enzymes [BR:pprf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DPRO_3048
Messenger RNA biogenesis [BR:pprf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DPRO_3048
Ribosome biogenesis [BR:pprf03009]
 Prokaryotic type
  rRNA helicases
   DPRO_3048
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-ProteinID: SOB59958
UniProt: A0A2C8FB06
Position
DPRO:3132693..3134465
AA seq 590 aa
MEKENTNEVVNENEAVDSSLPKMRFEDLPERLHDACVRVGWDKLMPVQELALPFLLNDND
VMVQARTGSGKTGAFVLPLLEKLDADLMECQALVMVPTRELAQQVASEARTLAGDKGINV
VAVYGGVGYKQQLDAFRDGAQLVVGTPGRILDHLVRRSLDLHKLKVLIFDEADRMLSVGF
YPDMVEVKRYLPPKIDGSYMFSATFPQSVLRLAREFMVDPEFLSLSSDETNVSAIAHQFV
EVQAMGKERKLIKLIELENPSSAIIFANTKRNVEFTAALLSQFGFDAEGLTSDLSQNKRE
QLMARIKAGQLRFLVATDVAARGIDIPELSHVFMMEPPEDPESYVHRAGRTGRAGASGKA
ITMVDVIQKMELERIATRFKIKFEEIKDPTEEDVAAIIEERLTALLEKRFRKLKPLERER
AARFLPLVQKYAADEEAVGLIAMLLDEIYQNTLHGKPEVPVAEQEKPREQRKPNQPSKGN
GKKPQRNRKPRSGGDHGGHGRPSGNDRSEGNRSDDKPSENRRPKGKRNDENRSGDKPKPR
KPSRPAGEQQSEPRPERRPEQSSGADKGGDGESGTKSRPRRRRPRRRRRR
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggaaaaggaaaacaccaacgaagtggtgaacgagaacgaagctgtagattcttcgctc
ccgaagatgcgttttgaggatctgcctgagcggttgcacgatgcgtgcgtgcgcgtgggc
tgggataaattgatgccggtgcaggagttggcgttgcctttcctgctcaatgacaacgat
gtcatggtccaggctcggaccggctccggcaagaccggtgcatttgtgcttcccctgctg
gaaaaactcgatgcagacctgatggaatgtcaggctctggtcatggtacccacacgcgaa
ctggcgcaacaggttgcgagcgaagcccgtactttggcaggagacaagggtatcaatgtc
gtcgctgtttatggtggcgttggttacaagcagcagttggatgccttccgcgacggcgct
cagctcgtggtcggtacgcccggtcgtatcctggaccacctggtcaggcgaagccttgat
ctgcataaattgaaagtgctgattttcgatgaggccgaccggatgctgtctgtcggtttt
taccccgatatggtcgaggttaagcgatacctgcccccaaaaattgatggcagctatatg
ttttccgctaccttcccgcagtcggtcctgcgtctggcgcgggaattcatggttgatccg
gaatttctcagcctgtccagcgatgagaccaacgtgtcggccattgcgcatcagttcgtc
gaggtccaggccatgggcaaggaacgcaagctgatcaagctgattgaactggagaatcct
tcttcggccattatctttgccaataccaagcgcaatgttgaatttacggcagcgcttctg
tcacagttcggattcgatgccgaaggattgacctcggacctgagccagaacaagcgcgaa
caactcatggcccgcatcaaggccggacaactgcgttttctggtcgctacagatgtggca
gcccgtggtatcgatatccccgaactctctcatgtcttcatgatggaaccaccggaagac
ccggagtcctacgtgcaccgcgcagggcgaaccggtcgcgccggggcatcgggcaaggca
atcaccatggtggatgtcatccagaagatggagcttgagcgtatcgccacacggttcaag
atcaaattcgaagagatcaaggacccgaccgaagaagatgtcgcagctatcattgaagag
cgccttaccgcactgcttgagaagcgattcagaaagctcaagccgcttgagcgtgaacgt
gctgcccgtttcctgccgcttgttcagaagtatgccgcagatgaagaagcggttgggttg
atcgccatgttgttggacgaaatttatcagaatactctgcacggcaagcccgaagtgcct
gttgctgaacaggaaaagcccagagagcaacggaagcccaaccagccctccaaaggcaat
ggcaaaaagccgcagcggaatcgtaagcctcggagcggcggcgaccatggtggacacggt
cgaccttcgggcaatgaccggtcagagggaaatcggtccgatgataagccctccgagaac
aggcgtcccaaaggcaaacgcaacgacgaaaatcgttcgggtgacaaacccaagccgagg
aagccttccaggcctgccggtgaacagcagtctgagccgcgcccggagagaaggcctgag
caatcttccggtgctgataaaggtggtgacggcgagtccggtaccaagtcgcgtccccga
cgcagacgccctcgtcgtagaagacgccgctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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