KEGG   Pan paniscus (bonobo): 100969555
Entry
100969555         CDS       T02283                                 

Gene name
KDM5B
Definition
(RefSeq) lysine demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pps  Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:pps00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pps01009]
    100969555 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pps03036]
    100969555 (KDM5B)
Enzymes [BR:pps01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     100969555 (KDM5B)
Protein phosphatases and associated proteins [BR:pps01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100969555 (KDM5B)
Chromosome and associated proteins [BR:pps03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100969555 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC PHD ARID zf-C5HC2 JmjN PHD_2 zf-PHD-like Lipoprotein_20
Other DBs
NCBI-GeneID: 100969555
NCBI-ProteinID: XP_003823056
UniProt: A0A2R9C6D7
Position
1
AA seq 1544 aa
MEAATALHPGPRPALPLGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTG
ICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKI
PHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILN
PYNLFLSGDSLRCLQKPNLTTDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRMRAEAMN
IKIEPEETTEARTHNLRRRMGCPTPKCENEKEMKSSIKQEPIERKDYIVENEKEKPKSRS
KKATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQE
CSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEED
VTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADIC
GMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE
LFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV
NFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIE
DEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVK
ELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFK
ALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVN
ELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSFEF
DVELPQLAEMRIRLEQARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMAR
LQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDW
LQDVEALQAGGRVPVLDTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECAVNTFLTE
NSPYSLLEVLCPRCDIGLLGLKRKQRKLKEPLPNGKKKSTKLESLSDLERALTESKETAS
AMATLGEARLREMEALQSLRLANEGKLLTPVQDVDIKICLCQKAPAAPMIQCELCRDAFH
TSCVAVPSISQGPRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTV
NWQHRAQQLLSSGNLKFVQDRVGSGLLYSRWQASAGQVSDTNKVSQPPGTTSFSLPDDWD
NRTSYLHSPFSTGRSCIPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTLLAKPSPAQQT
DRSSPVRPSSEKNDCCRGKRDGINSLERKLKRRLEREGLSSERWERVKKMRTPKKKKIKL
SHPKDMNNFKLERERSYELVRSAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEV
DWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTVKDAPSRK
NT seq 4635 nt   +upstreamnt  +downstreamnt
atggaggcggccaccgcgctgcacccaggcccgcgcccggcgctgcccctcgggggcccg
ggcccgctgggcgagttcctgcctccacccgagtgcccggtcttcgaacccagctgggaa
gagttcgctgaccccttcgctttcatccacaagatccggcccatagccgagcagactggg
atctgtaaggtgcggccgccgccggattggcagccaccatttgcatgtgatgttgataaa
cttcattttacgccacgtatccagagactgaatgaattggaggcccaaactcgtgtaaaa
ttgaatttcttggaccagattgcaaagtactgggagttacagggaagtactctgaaaatt
ccacatgtggagaggaagatcttggacttatttcagcttaataagttagttgcagaggaa
ggtggatttgcagttgtttgcaaggacagaaaatggaccaaaattgctaccaagatgggg
tttgctcctggcaaagcagtgggctcacatatcagagggcattatgaacgaattctcaac
ccctacaacttattcctgtccggagacagcctaaggtgtttgcagaagccaaacctgacc
acagacactaaggacaaggagtacaaaccccatgatattccccagaggcagtctgtgcag
ccttcggaaacgtgccccccagcccgacgagcaaaacgcatgagagcagaggccatgaat
attaaaatagaacccgaggagacaacagaagccagaactcataatctgagacgtcgaatg
ggttgtccaactccaaaatgtgaaaatgagaaagaaatgaagagtagcatcaaacaagaa
cctattgagaggaaagattatattgtagaaaatgagaaggaaaagcccaagagtcgatct
aaaaaagccaccaatgctgtggacctgtatgtctgtcttttatgtggcagtggcaatgat
gaagaccggctactgttgtgtgatggctgtgatgacagttaccataccttttgcttgatc
ccacctctccatgatgttcccaagggagactggaggtgtcctaagtgtttggctcaggaa
tgtagtaagccacaagaagcatttggctttgaacaagcagccagggactataccctccgt
acttttggggaaatggcagatgcgttcaaatctgattacttcaacatgccagtccatatg
gtccccacagagcttgttgagaaagaattttggagactagtaagcactattgaggaggat
gtcacagtggaatatggagctgacattgcctcaaaggaatttggcagtggctttcctgtc
cgagatgggaaaatcaaactctcacctgaggaagaggagtatcttgatagtggctggaat
ttgaacaacatgccagtgatggagcagtctgtccttgcacatattactgctgatatatgt
ggcatgaaacttccttggttgtatgtgggaatgtgcttttcttcattctgttggcatatt
gaagaccactggagctattcaattaactacttgcactggggtgagccaaaaacctggtat
ggagtcccagggtatgctgctgagcagctagaaaatgtaatgaagaaactagctccagaa
ctctttgtgtcccagccggatctcctccatcagcttgtgaccatcatgaaccccaatacc
ctgatgactcatgaagtgcctgtttaccgaactaatcagtgtgctggggagtttgtgatt
acatttccaagagcctaccacagtggttttaaccagggttttaattttgctgaggctgtt
aacttctgcactgttgattggctgccattaggccgacagtgtgtggagcattatcgcttg
cttcatcgatattgtgtattttcccacgatgagatgatctgcaagatggcttccaaggct
gatgtactagatgttgtagtggcttcaactgttcagaaagacatggccattatgattgag
gatgagaaagctttaagagaaactgtccgtaaattgggagtgattgattcggaaagaatg
gattttgagctgttgccagatgatgaacgtcagtgtgtaaaatgcaaaactacatgcttc
atgtctgccatctcctgttcttgtaaacctggccttcttgtttgcctgcatcatgtaaaa
gaattgtgttcctgtcctccttataaatataaattgcggtatagatacacgctggatgat
ctctaccctatgatgaatgcattgaagcttcgagcagaatcttacaacgaatgggccttg
aatgtgaatgaagctttggaggcaaagatcaacaagaagaaaagccttgtcagcttcaag
gctttaattgaagaatctgaaatgaagaaattcccagacaatgatcttttgcgacacctt
cgcctagtcacacaggatgcagagaagtgtgcctctgttgcgcagcaattgcttaatggc
aaaaggcaaactagatatcgatctggtggagggaaatcccaaaatcagttgacagtgaat
gagctccggcagtttgtaacacagctgtatgctcttccatgtgtcctcagtcagacacca
ttactaaaggatctcttgaatcgtgtagaagattttcaacagcatagtcagaaactactc
tctgaggaaatgcctagtgctgcggagctgcaggacttgctagatgtcagctttgaattt
gatgttgaacttccacagcttgctgagatgcgtatccgtttggaacaagcccgttggcta
gaagaggtgcagcaagcttgcctagaccccagctcccttactttagatgatatgagacgt
ctcatagacctaggggtagggctggccccgtattcagcagtggagaaagctatggcccgg
ctgcaggaactgctcacagtgtcagagcactgggacgacaaagccaagagtctcctcaag
gccaggccacgacattcattgaatagccttgctacggcagtaaaggaaatcgaagagatc
cctgcatatctgcccaatggtgcggctctgaaagactcagtgcagagagccagagactgg
cttcaggatgtagaggccctgcaggctggaggacgtgtgccagtgttagacacactcata
gaacttgttacacgaggccgatctatcccggtacatctgaattctttgccaagactggaa
accctagtagctgaggttcaggcttggaaagaatgtgctgttaatacattcttgaccgag
aattctccatattctctcttagaggtgctgtgtcctcgatgtgatattggccttttggga
ttgaaaaggaagcagagaaagttaaaggagcccttgccaaatggaaagaaaaaaagcacc
aaattagagagtctgagtgacctggagagagctttaactgaaagcaaggagactgcttca
gctatggcaactctcggggaagctcgcctaagggaaatggaagccttgcagtctctcaga
ctcgccaatgaagggaaattgctgacgcctgtccaagatgtggatataaaaatctgcctg
tgtcagaaggccccagctgcccctatgattcagtgtgaactctgcagggatgctttccac
accagttgtgtggcggtacccagtatttcacagggcccccgaatctggctttgtccccat
tgtcggaggtcagagaaacctccattagagaaaattctgcccctgctcgcctcccttcag
cgtatccgagttcgccttcctgagggagatgcacttcgatatatgattgaaagaaccgtg
aactggcagcacagagcccagcaactgctttcgtcagggaatcttaaatttgtgcaagat
cgagtgggctcaggactgttatatagcagatggcaagcctcagcaggacaggtgtcagac
acaaacaaggtatctcagcctcctggcacaacatcattttctttgcctgatgactgggac
aacagaacctcatatttgcactctcccttctcaactggacgaagttgtatccccctccat
ggcgttagtccagaagtgaatgaactattgatggaagcccagctgctccaggtatccctt
cctgaaattcaggaactttaccagactttacttgcaaagccaagccctgctcagcagact
gaccgaagctcaccagtgagacccagcagtgagaagaatgactgttgccgagggaagcga
gatggaattaacagtcttgagagaaaactgaagagacgcctggaaagagagggcctctcc
agtgagcggtgggaacgagttaagaaaatgcggacccccaaaaagaagaaaatcaaactg
agccaccccaaggacatgaacaatttcaagttagagagagagcgtagctatgaattagtt
cgttctgctgaaactcattccctgccctcggacacatcctattccgaacaggaagactct
gaggatgaagatgccatctgcccagctgtgagctgcctgcagccagaaggagatgaggtg
gactgggtccagtgtgatggcagctgcaatcagtggtttcatcaggtctgtgttggtgtc
tccccagagatggcagagaaagaagactacatctgtgtgcgctgtactgtgaaggacgca
ccaagccgaaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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