KEGG   Pan paniscus (bonobo): 100974093
Entry
100974093         CDS       T02283                                 
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
  KO
K10484  structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
pps  Pan paniscus (bonobo)
Pathway
pps03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100974093 (SLX4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pps04121]
    100974093 (SLX4)
   03400 DNA repair and recombination proteins [BR:pps03400]
    100974093 (SLX4)
Ubiquitin system [BR:pps04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul3 complex
    Adoptor and target recognizing subunit (BTB)
     100974093 (SLX4)
DNA repair and recombination proteins [BR:pps03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     100974093 (SLX4)
SSDB
Motif
Pfam: Slx4 BTB
Other DBs
NCBI-GeneID: 100974093
NCBI-ProteinID: XP_003815181
Ensembl: ENSPPAG00000043515
UniProt: A0A2R9CIP7
Position
16:complement(2502334..2532172)
AA seq 1833 aa
MKLSVNEAQLGFYLGSLSHLSACPGIDPRSSEDQPESLKIGQMMDESDEDFKELCASFFQ
RVKKHGIKEVSGERKTQKAASNGTQIRSKLKRTKQTATKTKTLQGPAEKKPPSGSQAPRT
KKQGVTKWQASEPALSVNGEEGVLASAPDPPVLWETAQNTQTGNQQEPSPNLSREKTREN
VPNSDSQPPPSCLTTAVPSPSKPRTAQLVLQRMQQFKRADPERLRHASEECSLEAAREEN
VPKDPQEETMVGNVYGLGPPAPESDAAVALTLQQEFARVGASAHDDSLEEKGLFFCQICQ
KNLSAMNVTRREQHVNRCLDEAEKTLRPSVSQIPECPICGKPFLTLKSRTSHLKQCAVKM
EVGPQLLLQAVRLQTAQPEGTSSPPVFSFSDHSRGLKRRGPTSKKEPRKRRKVDEAPSED
LLVAMALSRSEMEPGAAVPALRLESAFSEGIRPEAEKKSRKKKPPVSPPLLLVQDSETTG
RQIEDRVALLLSEEVELSSTPPLPASRILKEGWERAGQCPPPPERKQSFLWEGSALTGAW
AMEDFYTARLVPPLMPQWPAQGLMQEPVPPLVPPEHSEPSERRSPALHGTPTAGCSSRGP
SPSASQREHQALQDLVDLAREGLSASPWPGSGGLAGSEGTAGLDVVPGGLPLTGFVVPSQ
DKHPDRGGRTSLSLGLLVADFGAMVNNPHLSDVQFQTDSGEVLYAHKFVLYARCPLLIQY
VNNEGFSAVEDGVLTQRVLLGDVSTEAARTFLHYLYTADTGLPPGLSSELSSLAHRFGVS
ELVHLCEQVPIATDSEGKPWEEKEAENCESRAENFQELLRSMWADEEEEAETLLKSKDHE
EDQENVNEAEMEEIYEFAATQRKLLQEERAAGAGEDADWLEGGSPVSGQLLAGVQVQKQW
DKVEEMEPLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAEAPEQEAPEEALGHSSCSS
PSRDCRAERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQISEPEEQSGAVRERGLEVSHR
LAPWQASPPHPCRFLLGPPQGGSPRGSHHTSGSSLSTPQSRGGTSQVGSPTLLSPAVPSK
QKRDRSILTLSKEPGHQKGKQRRSVLECRNKGVLMFPEKSLSIDLTQSNPDHSSSRSQKS
SSKLNKEDEVILLLDSDEELELEQTKMKSISSDPLEERKALEISPRSCELFSIIDVDADQ
EPSQSPPRSEAVLQQEDEGALPENRGSLGSRGAPWLFCDRESSPSEASTTDTSWLVPATP
LASRSRDCSSQTQISSLRSGLAMQAVTQHTPRASVGNREGNEAAQKFSVIRPQTPPPQTP
SSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPHPISGDRAHFSRRFLKHSPPGP
SFLNQTPAGEVVEVGDSDDEQEVASHQANSSPPLDSDPPIPIDDCCWHMEPLSPIPIDHW
NLERTGPLSTSSPSRRMNEAADSRDCRSLGLLDTTPIRGSCTTQRKLQEKSSGAGSPGNS
RPSFLNSALWDVWDGEEQRPPETPPPAQMLSAGGAQKPEGLETPKGANRKKNLPPKVPIT
PMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDSEDESQSSQPLL
QAPRCQTLASQTYKPSRAGVRAQQEATTGPGAQRPKGPAKTKGPQHQRKHHESITPPSRS
PTKEAPPGLDDDAQIPASQESVATSVDGSDSSLSSQSSSSCEFGAAFESAGEEEGEGEVS
ASQAAVQAADTDEALRCYIRSKPALYQKVLLYQPFELRELQAELKQNGLRVSSRRLLDFL
DTHCITFTTAATRREKLQGRRRQPRGKKKVERN
NT seq 5502 nt   +upstreamnt  +downstreamnt
atgaaactgagtgtgaatgaggctcagctaggcttctacttgggttcactttctcatctg
tctgcctgtcctgggattgaccctcgctcctctgaagaccagcctgaaagccttaaaatt
ggtcagatgatggatgagtctgatgaggactttaaagaactctgcgctagctttttccaa
agggtgaaaaaacatggaatcaaggaagtgtcaggagaaaggaagacacaaaaggctgcc
tcaaacggcactcagataagaagcaaattgaaaaggaccaaacaaactgctaccaagacc
aaaacccttcaaggccctgcagagaagaaacctccatctggcagccaggcccctaggact
aaaaagcaaggggtaaccaaatggcaagcaagtgaaccggccctctctgtgaatggggag
gagggtgtgcttgcctctgctccagatccacctgtgctctgggaaacagcacaaaacacc
cagacgggtaaccagcaagaaccatcgccaaacctttccagagagaaaaccagagagaat
gtccccaacagcgactcccagcctcctccttcctgtttgacaacagcagtgccaagtccc
tccaaaccccgcacagctcaattggtcctacagcgaatgcagcagttcaagagagcagac
cccgagcgtttgagacacgcttcagaagagtgctccctcgaggctgcgcgggaagaaaat
gtcccaaaggatcctcaagaggagacgatggtggggaatgtgtatgggcttgggccccct
gccccagagagcgacgctgcggtggccttgaccctgcagcaggagtttgcacgggtagga
gcatcggcacatgatgatagcctggaggaaaagggtttgttcttctgccagatttgtcaa
aagaacctctcagccatgaacgtgacccgaagggaacagcatgtgaacaggtgcttggat
gaagctgaaaagacactaagaccttctgtgtctcagatccctgagtgcccgatttgtggg
aaaccgtttcttaccttaaagagcagaaccagtcacttgaagcagtgtgctgtgaagatg
gaggttggcccccagctcctgctgcaggctgtgcggctgcagacagcacagcctgagggt
accagcagcccgcccgtgttcagcttcagtgatcacagtagaggtctgaaacggagagga
cccaccagcaagaaagagccacggaagaggcggaaggtggacgaggcaccgtccgaggac
ctgctggtggccatggctctgtcccggtcggagatggagccgggtgcggctgtgccagcc
ctcaggctggaaagtgccttttctgaggggataagaccagaagcagagaagaaaagtcgc
aagaagaaacccccggtatcccccccattgttgttagtccaggactctgaaaccacaggc
cgacagatagaggaccgtgtggccctgctcctctctgaggaagtggaattgtctagcacg
ccaccacttcctgccagcaggattttaaaggaagggtgggaaagagcgggccagtgtcct
cctccacctgaacgcaagcagagctttctgtgggagggcagcgcactgactggggcctgg
gccatggaggacttctacacggccaggctggtccctcctctcatgccccagtggcctgcc
cagggcctcatgcaggagcccgtgccgcctctggtgccacctgagcactcagagccgagc
gagcgaaggtcacccgctctccacggcacccccactgcaggctgtagctccaggggcccg
tcgccttcggccagccagagggagcaccaggccctgcaggacctcgtggacctggcgagg
gagggactgagcgccagcccgtggcccggcagtgggggcctggctggctcggaagggact
gcagggttggacgtggtgcccggcggccttcctctgactgggtttgtggtgccatcgcag
gacaagcacccggacaggggcggccgcacctcgctctccctcgggctgctggttgctgac
tttggtgccatggtcaataacccacacctgagtgatgtccagtttcagacggacagcggg
gaggtgctttacgcccacaagttcgtgctttatgcccgatgcccgctcctcatccagtat
gtgaacaatgaaggcttctccgctgtagaggacggggttctgacccagcgtgtcctgctg
ggtgacgtgagcaccgaggccgcccgcacgttcctgcactatctctacactgcggacact
ggccttcctcctggccttagctctgagctgagctccctggcccacaggtttggcgtgagt
gagctcgttcacctgtgcgaacaggtgcctattgccactgactcagagggcaaaccatgg
gaggagaaggaagcagagaattgcgaaagcagggccgagaatttccaggaactcttgagg
tcaatgtgggcagatgaagaggaggaagcggagactttgttgaaatccaaggaccacgaa
gaagatcaagaaaacgtgaatgaagcagaaatggaagaaatttatgaatttgcagctact
cagcgaaagcttctccaggaagaaagggcagcgggtgccggcgaggacgctgactggctg
gagggtggcagtccggtttctgggcaactcctagcaggtgtccaggtgcagaaacagtgg
gacaaggtggaggagatggagccgttggagccaggaagagatgaggccgccaccacctgg
gagaagatgggacagtgcgctctcccgccaccccagggccagcactcaggggcacgggga
gcagaggcccctgagcaggaggcgccagaggaggcgcttggccattccagctgctccagc
ccttccagggactgccgggcagagagaaaagaaggctctcttccgcactcagatgatgct
ggggattacgaacagctcttctcatcaactcagggagagatctcagagccgtcccaaata
agtgagcccgaggaacaaagtggtgctgtcagggaaagggggctggaggtttctcatcgc
ctggctccctggcaggcgtctccaccgcacccgtgccgcttcctattggggcctccccag
ggcgggagtccccgcgggtctcatcacacaagtgggtcgtccctgtcaacaccccagtcc
cgtggcggaacttcccaggtgggctccccaaccttgctgtctccagctgtgccatcaaag
cagaaaagggacaggagcatcctcacgctgtctaaagagccagggcaccagaaaggcaaa
cagcgtcggtccgtgctggagtgcagaaataagggggtcctgatgttcccagaaaaatct
ctgtctattgacctaacccagtcaaatcctgaccattcgagctccagatctcagaaatct
tcatccaaactgaataaagaagatgaggtcatcctcttactggactcggatgaggagctg
gagctagaacaaaccaaaatgaagtccatttctagtgatcctctggaagaaaggaaagct
ctagaaattagccctaggtcctgtgagctgttttccatcattgatgttgatgcagatcag
gaaccttcccagagcccaccaagaagcgaagctgtgctgcagcaggaggatgagggggcg
ctgccagagaatcggggctctttgggcagcagaggggctccctggctgttctgtgaccgt
gagagcagccccagcgaggccagcaccacagacacctcgtggctggtgcccgccaccccg
ctggccagcagaagccgtgactgttcttcccagacccaaatcagcagcctcaggagcggg
ctggccatgcaggcggtgactcagcacacgcccagggcctcagtaggaaacagggaaggg
aacgaagccgcacagaagttttctgtcatcaggccccagacaccaccgccccagacaccg
tcctcatgcctcactcccgtctctccaggaacttctgacggcagaaggcaaggccacaga
agcccttcccgtccccaccccgggggccacccgcactcctctccactggctccacatccc
atctcaggggaccgcgcccacttcagcaggcggttcctgaaacactcgccgcctgggcca
agcttcctgaaccagaccccagcgggtgaagtggtggaagtcggagacagtgatgatgag
caggaggtggcctcccatcaggccaacagcagccccccactggacagtgaccccccaatt
ccaattgacgactgctgctggcacatggagcccctctcgccaattcccattgaccactgg
aacctggagcggaccggccccctgagcaccagcagccccagccgcaggatgaacgaggcc
gccgacagccgtgactgtcgctccctgggactcctggacaccacccccatccgaggaagc
tgcactacccagaggaaattgcaagagaagtcctcgggcgcgggctccccggggaacagc
aggccgagctttctgaattcggctctgtgggatgtttgggacggggaagagcagaggcct
ccagagacccctcctccggcccagatgctaagcgctggtggagctcagaagcccgaaggg
ttagagacacccaaaggtgctaatcggaagaagaacttgccccccaaagtgcccataacg
ccgatgccacagtattccattatggagacgccggtgctgaagaaggaactggataggttt
ggagtccgccctctgcctaaacgccagatggttctgaagctgaaggagatattccagtac
actcaccagaccctggactcagactccgaggacgagagccagtcctcacagccgctgttg
caggcgcctcgctgccagaccctcgcctcccagacctacaagccttcaagggcaggggtc
cgtgcccagcaggaggccaccacaggacctggggcccaaaggcccaagggacctgctaag
accaagggcccccaacatcaaaggaagcatcatgaaagcatcacacccccaagcaggtcg
cccaccaaggaggcacctccaggcctcgatgatgacgcccagatcccagcctctcaagaa
tccgtggccacctctgtggatggcagtgacagctccttgagctcacagagttcttcctcc
tgtgagtttggagcggcatttgagtctgcaggtgaagaggagggcgagggggaggtcagt
gcctcgcaggcagccgtgcaggcggcggacacagacgaggcgctgaggtgctacatccgc
tccaagccggccctgtaccagaaggtgctgctgtaccagccctttgagctgcgggagctg
caggcagagctgaagcagaatggcctccgtgtgtcctcgcgcaggctgttggacttcctg
gacacccactgtatcaccttcactactgccgccacccgcagggagaagctccagggcagg
aggcggcagcctcggggcaagaagaaggtggagcggaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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