KEGG   Pan paniscus (bonobo): 100977348
Entry
100977348         CDS       T02283                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
pps  Pan paniscus (bonobo)
Pathway
pps03018  RNA degradation
pps03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100977348 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100977348 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100977348 (LSM4)
   03041 Spliceosome [BR:pps03041]
    100977348 (LSM4)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100977348 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100977348 (LSM4)
Spliceosome [BR:pps03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100977348 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 100977348
NCBI-ProteinID: XP_003817824
Ensembl: ENSPPAG00000044045
UniProt: A0A2R9CTE0
Position
19:complement(17785580..17801866)
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttcccttgtcactgctgaagacggctcagaatcaccccatgttggtggagctgaaa
aatggggagacgtacaatggacacctggtgagctgcgacaactggatgaacattaacctg
cgagaagtcatctgcacgtccagggacggggacaagttctggcggatgcccgagtgctac
atccgcggcagcaccatcaagtacctgcgcatccccgacgagatcatcgacatggtcaag
gaggaggtggtggccaagggccgcggccgcggaggcctgcagcagcagaagcagcagaaa
ggccgcggcatgggcggcgctggccgaggtgtgtttggtggccggggccgaggtgggatc
ccgggcacaggcagaggccagccagagaagaagcctggcagacaggcgggcaaacagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system