KEGG   Pseudomonas sp. UW4: PputUW4_03468
Entry
PputUW4_03468     CDS       T02357                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ppuu  Pseudomonas sp. UW4
Pathway
ppuu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PputUW4_03468 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppuu03400]
    PputUW4_03468 (uvrB)
DNA repair and recombination proteins [BR:ppuu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PputUW4_03468 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PputUW4_03468 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_22 AAA_30 UB2H
Other DBs
NCBI-ProteinID: AFY20661
UniProt: K9NKM9
Position
complement(4033114..4035129)
AA seq 671 aa
MSEFQLVTRFEPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLADLQY
TRNDMEFARATFRVRGDVIDIHPAESDFEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLGAVEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGREAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWESISPQTIFVSATPGNYEAEHAGRVIDMVVRPTGLVDPQ
IEIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNMANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEENARYEAELRSPGEIAKRIKALEEKMYALARDLEFEAAAQMRDE
IGKLRERLITV
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtctgaattccagctagtcacccgtttcgagcccgccggcgatcagccggaagccatc
cgcctgatggtcgagggcatcgaggccgggctggcgcaccagacgctgctcggtgtgacc
ggctcgggcaagaccttcagcatcgccaatgtgatcgcccaggtgcagcgcccgacgctg
gtgctggcgccgaacaagaccctggcggcgcagttgtacggcgagttcaaggcgttcttc
ccgaacaacgcggtggagtatttcgtttcctactacgactactaccaacctgaagcctac
gtgccgtcctcggacaccttcatcgagaaagatgcctcgatcaacgaccacatcgagcag
atgcgattgtcggcgaccaaggcattgctcgagcgcaaggacgcgatcatcgtcaccacg
gtgtcgtgcatctacggcctgggcagcccggaaacctatttgaagatggtgttgcacgtg
gatcgcggcgacaagctcgaccagcgtgagttgctgcgccgcctggccgacctgcaatac
acccgcaatgacatggaattcgcccgggcgaccttccgcgtgcgcggcgatgtgatcgat
atccatccggcggaatcggatttcgaagcaatccgcatcgaactcttcgacgatgaagtg
gaaagcctgtcggccttcgatccattgaccggcgaagtgatccgcaagctgccgcgcttc
accttctacccgaagagccactacgtcacgccccgggaaaccctgttgggcgcggtcgaa
ggcatcaaggtcgagttgcaggagcgcctggaatacctgcgctccaacaacaaactggtg
gaagcccagcgactggagcagcgcacccgtttcgatctggagatgatcctcgaactgggt
tactgcaacggcatcgaaaactactcccgttacctgtccggtcgcgaagccggcgcgccg
ccaccaaccctttacgattacctgccggccgacgccttgctggtgatcgacgaatcccac
gtcagcgttccgcaggtgggcgccatgtacaagggcgaccgctcgcgcaaggaaaccctg
gtcgaatacggtttccgcctgccctcggccctggacaaccggccgatgcgtttcgatgaa
tgggaaagcatcagcccgcagacgattttcgtttcggcgacgccgggcaactatgaagcc
gagcacgccgggcgcgtgattgacatggtagtgcgcccgaccgggctggtggacccgcaa
atcgagatccgcccggcactgacccaggtcgacgacttgctgtcggaaatcaccaagcgt
gtcgctctggaagagcgggtgctggtcacgacgctgaccaagcgcatggccgaagacttg
accgactatctggccgaccacggcgtgcgcgtgcgctacctgcactcggacatcgacacc
gtggagcgggtcgaaatcatccgcgacctgcgcctcggcaccttcgatgtgctggtgggc
atcaacctgttgcgcgaaggcctggacatgccggaagtgtcgctggtggcgatcctcgat
gccgacaaggaaggcttcctgcgttccgagcgctcgctgatccagaccatcgggcgggcg
gcgcgtaacctcaatggccgggcgattctgtatgccgaccgcatcacgggctccatggag
cgggcgatcggcgaaaccgagcgtcgtcgcgacaagcagattgcctttaacatggccaat
ggcatcacgcccaaaggcgtgttcaaggacgtcgccgacattatggaaggcgccacagtg
ccgggttcgcgcagcaagaagcgcaagggcatggccaaggccgccgaagagaacgccagg
tacgaagccgaattgcgctcgccgggcgagatcgccaagcgtatcaaggccctggaagag
aagatgtatgcattggcgcgtgatctggagtttgaagcagcggcgcagatgcgcgacgag
attggcaagttgcgcgagcggttgatcactgtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system