KEGG   Cutibacterium avidum: PALO_03540
Entry
PALO_03540        CDS       T02632                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
pra  Cutibacterium avidum
Brite
KEGG Orthology (KO) [BR:pra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pra03016]
    PALO_03540
Enzymes [BR:pra01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     PALO_03540
Transfer RNA biogenesis [BR:pra03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    PALO_03540
 Prokaryotic type
    PALO_03540
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C DKCLD PseudoU_synth_2 DUF2244
Other DBs
NCBI-ProteinID: AGJ77323
Position
776801..777697
AA seq 298 aa
MKGNPDVPSGVLVVDKPAGVTSHQVVGRVRRLMGTRKVGHAGTLDPMATGVLVIGINRAT
RLLGHLSLHDKDYTATMRLGVSTVTDDAEGDVTAITDASGIDDDAILAAMARQTGEILQV
PTAVSAIKINGQRAYAKVRAGEDVVLKPRAVTVSRFEATEIRRHGEVIDVDVEVTCSSGT
YVRALARDVGADLGVGGHLTALRRTRIGPFDLTAACPDIFADDEVAPTPMTMAEAAGLSF
PVVEVTDDQEAAIRVGRRLDLTVPADVTAMVARTGEMLALYRPDGEKKERSRAICVLV
NT seq 897 nt   +upstreamnt  +downstreamnt
atgaagggcaatcctgacgttccctctggcgtcctcgtcgttgacaaacccgccggcgtc
acctcgcaccaggtcgtcggacgggtgcgtcgcctcatgggcacccgcaaggtcgggcat
gccggaaccctggacccgatggccaccggagttctggtcatcgggatcaatcgcgccacc
cgactcctcggccatctgtccctgcacgacaaggactacaccgccacgatgaggttgggg
gtgagcaccgtcaccgacgacgccgagggcgatgtcactgccatcaccgacgcatctggg
atcgatgacgacgccatcctcgccgcgatggcacgccagaccggtgagatcctgcaggtt
cccaccgccgtcagcgcgatcaagatcaacggtcagcgcgcctacgccaaggtgcgtgcc
ggggaagacgtcgtcctgaaaccgcgtgcggtgaccgtctcccgattcgaggccactgag
atacgacgccatggggaggtgatcgacgtcgacgtcgaggtcacctgttcttccggcacc
tatgtgagggccctggcccgtgacgtgggtgccgatcttggagtggggggtcacctcact
gcgttgcggcgaacccggatcggacctttcgacctcaccgcggcttgccctgacatcttt
gccgatgatgaggtcgccccgaccccgatgacgatggctgaggctgccgggctgagcttc
cccgtcgtcgaggtcaccgatgaccaggaagctgccattcgggtcggacgacgtctggac
ctgaccgtccccgctgacgtgaccgcgatggtcgcccgaaccggagagatgttggccctt
tatcggccagatggcgagaaaaaggaacggagtcgcgcaatctgtgtgctggtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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