KEGG   Paenibacillus riograndensis: PRIO_6385
Entry
PRIO_6385         CDS       T03849                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
pri  Paenibacillus riograndensis
Pathway
pri03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PRIO_6385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pri03019]
    PRIO_6385
   03009 Ribosome biogenesis [BR:pri03009]
    PRIO_6385
Enzymes [BR:pri01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PRIO_6385
Messenger RNA biogenesis [BR:pri03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     PRIO_6385
Ribosome biogenesis [BR:pri03009]
 Prokaryotic type
  rRNA helicases
   PRIO_6385
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 DUF1604 AAA_19
Other DBs
NCBI-ProteinID: CQR58732
UniProt: A0A0E4CZN5
Position
I:complement(7445169..7447034)
AA seq 621 aa
MPGFKELGVSELLNGLLQGQGIAKPTPVQEEAIPPLVQGLDVIARAKTGTGKTLAFLLPI
MDKIRVEQAYPQALIMAPTRELALQITEEARKLARHTGVKILAVYGGQDVEKQLRKLEGG
RHLIIGTPGRLLDHIRRGTLDLGGVKMLVLDEADQMLHMGFLEDVETIITAVPYRRQTML
FSATMPDPIKRLASKYMKEPLDIVIKSGSPIPLENIRQQVVECSDRNKEEALIALIERDR
PYLAMIFCRTKRRVSKLNEALQAAGYDCDELHGDLSQSKREAVMKRFREAKLQLLVATDV
AARGLDVEGITHVFNYDLPLDADSYIHRIGRTGRAGGKGLAITFASPRERAGLELIEHGI
SQRLDRRRYEKDEFGVGEFISVQGGRQNAVPEGARNGRGGRAQGRSGGAPRAEAGARPGA
GGRGRGKEAGGWGAPAEGRSRSAAAGGKRSGWGDAAPRGGGHAGKSAAKPRTGGGYGSYD
ARSSSPAAGYAAGESAAGQRGGKGAAGSKGGPGSGYSANVSRGAEAGGFSYGASKGAGSG
SGYNPGGAQASPKHRANVARSNDAGGWSSSAPAKGGGARSGSKGGKGGYGPGGRSSGGKA
SSRGGRGNGSGGTRGGRGSSR
NT seq 1866 nt   +upstreamnt  +downstreamnt
ttgccgggttttaaggaactgggagtatcggaattattgaacggcctgcttcagggtcag
gggattgctaagcctacaccagtgcaggaagaagctattcctccgctggtgcagggattg
gacgttatcgcaagggccaagacgggaacaggcaaaacactggccttcctgctgccgatt
atggacaagatccgtgtggagcaggcatatccgcaggcgcttatcatggcaccgacccgc
gagctggctttgcagattaccgaggaggcccgcaagctggcgcgccataccggagtgaaa
attctggccgtatatggcggccaggatgtggaaaagcagctgcgcaagctggaaggcggc
cggcatctgattatcgggacgccgggcaggctgctggatcatatacgccggggaacgctg
gatctcggcggggtcaagatgctggtgctggatgaagcggaccaaatgctgcatatgggc
ttcctggaggatgtggaaaccattattacggctgtgccttaccgccgccagacgatgctg
ttctccgcgaccatgccggacccgatcaagcggctggccagcaaatacatgaaagagccg
ctggatatcgttattaaaagcggttcccctattccgctggagaatatccgccagcaggtg
gtggaatgctcggaccgcaacaaggaagaagctttgatcgcgctgatcgagcgggaccgt
ccttacctggcgatgatcttctgccggacgaaacgccgtgtgtccaagctgaatgaagca
ctccaggccgccggctatgattgcgacgagctgcacggcgacttgtcgcagagcaaacgc
gaagcggtgatgaaacggttccgcgaggcgaagctgcagctgctggtggccacggatgtg
gctgcccgcggtctggacgtcgagggcatcacgcatgtcttcaactatgatctgccgctg
gatgcggacagctacattcaccggatcggccggaccggccgcgcaggcggcaagggactg
gcgatcacgttcgcttcgccgcgcgaacgcgccgggctcgagctgatcgagcacggcatc
tcccagcggctggaccgccgccggtacgagaaggatgaattcggcgtaggcgaattcatc
tccgtgcagggcggacgccagaacgccgtgccggaaggcgcccgcaatggacgcggcggg
cgcgcccaggggcgcagcggcggagctccgcgcgccgaagccggggcgcggccgggtgcg
ggcggacgcggccgcggcaaggaagcaggcggctggggcgcgcctgcagaagggcgcagc
cgcagcgcagcggctggcggcaagcgcagcggctggggcgacgctgcgccaagaggcggc
gggcacgccggcaaaagcgcggcgaagccaagaacgggcggcggctacggcagctacgac
gcccgcagcagcagcccggctgcaggctatgcagccggagaaagcgccgccggccagcgc
ggcggcaaaggggccgccggttccaaaggcggcccgggcagcggctacagcgccaacgtt
tcccgtggcgcggaagccggaggcttcagctacggagcctccaaaggagcgggctccggc
agcggatataatccgggcggcgcacaggccagcccgaaacatagagcgaatgtagcccgc
agcaatgacgccgggggctggagttcgtcagcgcctgccaaggggggcggcgcacgcagc
ggctccaaaggcggcaaaggcggctacggcccgggagggcgcagcagcggaggcaaagct
tcatcgcgcggcggccggggcaacggctccgggggcacgcgcgggggccgaggctcctcc
agatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system