KEGG   Phytophthora sojae: PHYSODRAFT_354695
Entry
PHYSODRAFT_354695 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
psoj  Phytophthora sojae
Pathway
psoj03022  Basal transcription factors
psoj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PHYSODRAFT_354695
  09124 Replication and repair
   03420 Nucleotide excision repair
    PHYSODRAFT_354695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psoj03021]
    PHYSODRAFT_354695
   03400 DNA repair and recombination proteins [BR:psoj03400]
    PHYSODRAFT_354695
Enzymes [BR:psoj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     PHYSODRAFT_354695
Transcription machinery [BR:psoj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PHYSODRAFT_354695
DNA repair and recombination proteins [BR:psoj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PHYSODRAFT_354695
SSDB
Motif
Pfam: DEAD_2 HBB Helicase_C_2 ResIII DEAD SNF2-rel_dom nSTAND3 Alpha_Helical AAA_11
Other DBs
NCBI-GeneID: 20649671
NCBI-ProteinID: XP_009527855
JGI: Physo3_354695
UniProt: G4ZIZ2
Position
Unknown
AA seq 791 aa
MKVDIDGLEVLFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLALVLAYK
HAHPTAGKLVYCTRTVPEMAKCVEEIKKLAQYRTAHYGADKAQLTAVCLSSRRNMCVHPR
VMAHADGEDVDGQCRKMTASWVRARAAKAREAAASGDVPMDGGEQVREVETCSFYENYDA
RKSDDTVLPPGIYSVDDLKEIGAKKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVS
RSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVNKLKQADKARLD
AEYRRLVDGLRSSNAVVAPSYSDPATNRNIDTSNDIMIANPVLPDDVLDEAIPGNIRRAE
HFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAINMEIKPMKFCYTRLNSLLRTLE
VTNLEEYNALTDVADFATLVATYAEGFMLIIEPFDSASGVHDPVLQLSCLDASLAIRPVF
ERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKF
DLRDDMSVVRNYGTLLLEMASCTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLSSKLLF
IETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYT
LSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRAD
KRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVDESTNVNSILLDAEGVAKWL
GKHPKEDEPMQ
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgaaggtggacatcgatgggctggaggtgctcttcccgtacgagcgcatgtactcggag
cagctgcagtacatgcgcgagctgaagcgcgcgctggacgcgcagggccactgcatgctg
gagatgcccacgggcacgggcaagacggtgtcgctgctggcgctcgtgctggcctacaag
cacgcgcacccgacggccggcaagctcgtgtactgcacgcgcactgtgcccgagatggcc
aagtgcgtggaggagatcaagaagctcgcgcagtaccgcaccgcgcactacggcgccgac
aaggcgcagctcacggccgtgtgcctcagctccaggcgcaacatgtgcgtgcacccgcgc
gtcatggcacacgccgacggcgaggacgtggacggccagtgccgcaagatgacggcgtcc
tgggtgcgcgcgcgcgcggccaaggcgcgtgaggccgcggccagcggagacgtcccaatg
gacggaggggaacaggtgcgggaggtcgagacctgctcgttctacgagaactacgacgcg
cgcaagagcgacgacaccgttctaccgcccgggatctactcggtggacgacctcaaagag
atcggcgccaagaaggggtggtgcccctacttcctgacgagatacgtcgtcacctttgcg
gacgtggtggtctacaactaccagtacatgctggaccccaaggtgagtcagctggtgtcc
aggagcttcgagaaggagagcatcgtggtcttcgacgaggcacacaatatcgacaacgtg
tgcatcgaagcgctgagtgtggacctggaccgacgctcgctggacagggcgtccaggaac
ttgaccacgctgtccagtcaggtgaacaagttgaagcaggcggacaaggcgcggctggat
gcagagtatcgcaggcttgtggatgggctgaggtcgagtaatgccgtcgtggcgcccagc
tactcggacccggccacgaaccgcaacattgacacaagcaacgacatcatgatcgctaac
ccagtgctgcccgatgatgtcctggatgaagctatccccggtaacattcgacgcgcagag
cacttcgtggcgttcatgcgccgacttattgagtacctgcggcagcggattcgagtgcgg
caggtggagtcggagacgccgcaggcgttcttgcaccacctacatcaggctatcaatatg
gagatcaagcccatgaagttttgctacacgcgactcaactcgctgctgcgcacgctggaa
gtgacgaacttggaggaatacaacgcgctgactgatgtggcggactttgcgacgctggtg
gccacctacgcagaaggcttcatgctgattattgagccgttcgacagcgcgtctggcgtg
cacgaccctgtgctgcagctttcctgcttggacgcgtcgctggcgatccgccccgtgttc
gaacgcttctccagcgtcattattacgtccggcacgctgtctcccattgacttatacccg
cggctgctgaacttcaaccccgtgatccgcgagtcgctgcccatgtccgtgtatcgctcg
agtatttgtccgctggtgatcacgcgcggaagtgaccagatgcctgtgagcaccaagttc
gatctccgtgacgacatgtcggttgtgcgcaactacggcactttgttactcgagatggca
tcttgcacgccggacggcatggtgtgcttcttcccgtcgtatctgtacatggagaagatc
atcggccagtgggactcgcttggcgtgctaaagcgtgtgctaagcagcaaactacttttc
atcgagaccaaggacatcgtggagacgaccctcgcgctggataactacaagaaggcctgt
gactgtggtcgaggcgccatcttcttctccgtcgcgcgtggtaaggtggcagaaggaatc
gatttcgaccgtcactatggacgcgcagtgattctattcggcatcccgttccagtacacg
ctgtccaacacgttgcgcgcgcgacttgagtacctgcgctacacgcaccagatccgtgag
ggcgacttcctcacattcgacgcgctacgtcaagccgctcagtgcgccggtcgcgttctt
cgtagcaagactgactacggtctcgtcatcttcgctgactcgcgctacaatcgcgctgac
aagcgaaccaagctgcctccgtggatcacgcagttcctcgtggactcgcacctgaacctg
tcggtggatatggccgtgttcatggccaagaagtacctgtcgctgatggcgcagcctgtg
gacgagtccaccaacgtcaactccatcctgctagatgccgagggcgtcgccaagtggctc
ggcaaacaccccaaggaggacgaacccatgcagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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