KEGG   Pseudomonas cremoricolorata: LK03_02570
Entry
LK03_02570        CDS       T03354                                 
Name
(GenBank) pseudouridine synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
psw  Pseudomonas cremoricolorata
Brite
KEGG Orthology (KO) [BR:psw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psw03016]
    LK03_02570
Enzymes [BR:psw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LK03_02570
Transfer RNA biogenesis [BR:psw03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LK03_02570
 Prokaryotic type
    LK03_02570
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 PUA_3 TruB_C
Other DBs
NCBI-ProteinID: AIR88192
UniProt: A0A089WP03
Position
complement(560986..561903)
AA seq 305 aa
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQLGQTTNTADAEGEVLRTREVTVGRADIEAALPAFRGPIS
QVPPMYSALKRDGQPLYKLARAGEVVEREARSVTITRLELLHSEGTRARLSVGCSKGTYI
RTLVEDIGEVLGCGAYVAELRRTHAGPFELAQTVTLEALEQAHAEGGNEALDRFLMPVDS
GLLDWPLVCLSANSAFYWLHGQAVRAPDAPQFGMVRVQDDNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq 918 nt   +upstreamnt  +downstreamnt
gtggcgcaggtcaaacgtattcgccgcaatgtcagcggcatcatcttgctcgacaagcca
ttagggttcacctccaatgctgccttgcagaaagtacgctggttgctcaatgcggaaaag
gccggccacacgggcagtctcgatccgttggccaccggcgtgctgccactgtgcttcggc
gaggcgaccaagttctctcagtacctgctcgattccgacaaaggttacgagacggtcatg
caactgggtcagaccaccaataccgccgacgctgaaggcgaagtgctgcgaacccgggaa
gtgaccgttggtcgcgccgatatcgaagcggcactgccggcgtttcgcggcccgatcagc
caggtgccgccgatgtattcggccctcaagcgtgacggccagccactttacaagctcgct
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattacgcgcctggagctg
ctgcacagcgaaggcacccgtgcgcggctgtcggttggctgcagtaaaggcacttatatc
cgcacactggtggaagacatcggcgaagtgctgggctgtggtgcgtacgtcgcggaactg
cggcggacccacgccgggcccttcgagctggcgcagactgtgaccctggaagcgctggag
caggcccatgccgaaggtggcaacgaggcgctcgaccgcttcctcatgccggtcgatagc
ggtctgctcgattggccgctggtgtgcctgtcggccaacagtgcgttctactggctgcat
ggccaggcggtgagggccccggatgccccgcagttcggcatggtccgggtccaggatgac
aacggccgcttcatcggaatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcggaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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