KEGG   Psychrobacter sp. AntiMn-1: AOT82_1244
Entry
AOT82_1244        CDS       T04964                                 
Name
(GenBank) excision nuclease subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
psya  Psychrobacter sp. AntiMn-1
Pathway
psya03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psya00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AOT82_1244
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psya03400]
    AOT82_1244
DNA repair and recombination proteins [BR:psya03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AOT82_1244
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AOT82_1244
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 RsgA_GTPase AAA_22 AAA_23 DnaJ_CXXCXGXG BCA_ABC_TP_C AAA_33 NACHT Viral_helicase1 nSTAND3 AAA_25 AAA_21 cobW ExoX-like_C
Other DBs
NCBI-ProteinID: AOY43623
UniProt: A0A1D9CYK9
Position
1390914..1393826
AA seq 970 aa
MAHDHIAIRGARTHNLKNIDLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLSQMEKPEVDSIEGLSPAIAIEQKSTNHNPRSTVGTITEIYDYLRLLYARIGTP
YCPEHGEPMVAQSVTEMVDQVMALPDETKLMILAPVVRERKGEHTVLLEQLIGQGFVRVR
VDGHVYDTDELPTLDKKKKHTIEVVVDRFKVRDDLGNRVAESLETALRLGQGLVTLHFMD
GNPTEGGSDNQVMSAKHSCPICDRAVPELEPRMFSFNNPYGACPTCDGLGKRQYFAAEKL
ITHVDKTLNQGAINGWDKRHSYYFGLLTTVCKHFKIDMDTPWTELPKKQQELIMHGSGKE
KLTFNFTDERGRKTNKTVPFEGVLPYLERRYAKTQSNLVRDELAKYLADTTCNVCDGARL
NEISRNVRVDEQTIADIVKLSIGDAADYYKTLKIDGHKGEVAEKIFKEINERLNFLVSVG
LDYLTLARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLKTLTRL
RDLGNTVLVVEHDEDAIRQADHVIDIGIGAGVHGGHIIAEGTVDEVMATPDSLTGQYMSG
EKRIEIPKVRHKAKTVEVEVKGKAKAKTKKVPMTIELKGASGNNLKDVDLSLPVGVMTCV
TGVSGSGKSTLINRTLMPIAATQLNNASTLIADKHDSISGLEHLDKMVDIDQSPIGRTPR
SNPATYTGVFTPVREMFAQTPEARARGYKAGRFSFNVKGGRCEMCQGDGLIKVEMHFLPD
MYVPCDTCEGKRYNRETLEIHYKGKTIADVLEMTVEDATEFFSAIPAIYRRLQALMDVGL
SYIRLGQSASTLSGGEAQRVKLARELAKRDTGQTLYILDEPTTGLHFHDIDKLLNILHAL
RDKGNTIVVIEHNLDVIKTADWVIDLGPEGGKGGGMIIAEGTPEEVAEVEGSHTGEFLKP
MLKQAMKEVS
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggcacatgaccatatcgcaatacgcggcgcacgtactcataatttaaaaaacattgat
ttagacattccacgagataaattcgtggtaatcactggtttatccggttctggtaaatcg
tccttggcttttgatacgctatatgctgaagggcaacgtcgctatgtcgagagtttgtca
gcatatgcgcgccagttcttatcgcagatggaaaagccggaagtcgatagcatcgaaggc
ttgtcaccggcaattgctattgagcaaaaatcgaccaaccataatccacgctcaacggtc
ggtacgatcactgagatttatgattacctgcgtctattatacgcgcgtatcggtacgcct
tattgcccagagcatggcgaacctatggtggcgcagtcggtgaccgagatggttgatcag
gttatggcactccccgatgagaccaagcttatgattcttgcgccagtagtgcgtgagcgt
aaaggagagcatacagtgctgcttgagcaattgatcggtcaagggtttgtacgcgtacgc
gtcgatggtcatgtctatgatactgacgagctaccgacactcgataaaaagaaaaaacac
accatcgaagtggtggttgatcgctttaaagtacgtgatgacttgggcaaccgtgtcgct
gagagcttggagaccgcgctacgtttgggacaaggtctagtgacgctgcactttatggat
ggtaaccctactgagggcggctctgataatcaagtgatgtctgccaagcacagctgtccg
atttgtgatcgcgctgtacctgagcttgagccgcgcatgtttagttttaacaacccctac
ggtgcttgcccaacttgtgatggactcggtaagcgtcagtatttcgctgctgaaaagctc
attactcatgttgataagacgctcaatcaaggcgcgattaacggttgggataagcgccac
tcgtactattttgggctgctaactaccgtttgtaagcattttaaaatcgatatggataca
ccgtggacggagctgcccaaaaagcagcaagagctgatcatgcacggctcaggtaaagaa
aagctcacctttaactttaccgatgagcgcggacgtaaaaccaataaaaccgttcctttt
gaaggcgtactaccctatcttgagcgccgttatgccaaaacgcaaagtaacctcgtccgc
gatgagctggctaaatacttagctgataccacgtgtaatgtctgtgatggcgcgcgtctg
aacgagatttcgcgcaatgtgcgtgtcgatgaacaaaccatcgctgacatcgtcaagctc
tctattggcgacgcggcggactattataagactctaaagattgacggtcataaaggtgaa
gtggcagagaagatctttaaagagattaacgagcgcttaaacttcctcgttagcgttggc
ctcgattatctaaccctagcacgctctgccgaaaccctatccggcggtgaagcgcagcgt
attcgtttggccagtcaaattggtgccggtctgatgggcgtcatgtatgtccttgatgag
ccgtccattggcttgcatcagcgtgataacgaccgcttgcttaaaactttaacacgcttg
cgtgatttaggtaataccgtactggtcgttgagcacgatgaagatgcgattcgtcaagcg
gatcacgtcatcgatatcggtattggggctggcgtacacggtggtcatatcatcgccgag
ggcacggtggatgaagtgatggcaacgccagactcgctcaccggacaatatatgtcgggc
gaaaaacgcattgagataccaaaagtgcggcataaagccaaaaccgtagaggtcgaggtt
aaaggtaaagcgaaagccaaaacaaaaaaggtaccgatgactatcgagctcaaaggcgcc
tcaggcaacaacctaaaagacgtcgatctgagcctgcccgttggggtgatgacttgtgtc
acgggtgtatcgggttctggtaaatcaacgctgattaaccgtacgcttatgcctatcgcc
gccacacaattaaacaatgcctcaacgctaatcgcggataagcatgacagcattagcggt
cttgagcatttggataaaatggtcgatatcgatcaaagcccaattggtcgtaccccgcgc
tccaatcctgcgacttatactggcgtcttcactcccgtgcgtgagatgttcgcccagaca
ccagaagcccgcgcacgtggttataaagctgggcgctttagcttcaacgtcaaaggcgga
cgctgtgagatgtgccaaggcgatggtctcatcaaagttgagatgcattttttaccggat
atgtatgtgccgtgtgacacctgtgaaggcaagcgttataaccgcgagaccttagagatt
cactataaaggcaaaaccatcgctgacgtgctcgagatgacggtagaggacgccactgag
ttcttctcggcgattccagcgatctatcgtcgcctgcaagcgttgatggatgtggggctg
agctacattcgcttgggtcagtctgcatcgacactatctggcggtgaagcgcagcgggtg
aaactggcacgcgagcttgccaaacgcgacacgggacagacgctttatatcttggatgag
ccaaccacaggtttgcatttccatgatatcgataagctgctcaacatcttgcatgcgcta
cgcgataaaggtaacaccatcgtggtcattgagcataacttggatgttatcaaaaccgcg
gattgggtgattgatcttggccctgaaggcggtaaaggcggcggtatgatcatcgctgag
ggtacgccagaagaggtcgcagaggtcgaaggctcacacacgggtgagtttttaaagccg
atgcttaagcaagcgatgaaagaagtgagttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system