KEGG T04476: AOT13

Parageobacillus thermoglucosidasius DSM 2542: AOT13_09315

Entry

AOT13_09315       CDS       T04476

Symbol

truB

Name

(GenBank) tRNA pseudouridine synthase B

K03177

tRNA pseudouridine55 synthase [EC:5.4.99.25]

Organism

ptl Parageobacillus thermoglucosidasius DSM 2542

Brite

KEGG Orthology (KO) [BR:ptl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ptl03016]
    AOT13_09315 (truB)
Enzymes [BR:ptl01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     AOT13_09315 (truB)
Transfer RNA biogenesis [BR:ptl03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AOT13_09315 (truB)
Prokaryotic type
    AOT13_09315 (truB)

SSDB

Motif

Pfam:

TruB_N TruB_C_2 PseudoU_synth_2

Other DBs

NCBI-ProteinID:

ALF10195

Position

1866251..1867159

AA seq 302 aa
MDGVLLLHKPPGMTSHDCVARIRRMLRTKKVGHTGTLDPNVSGVLPICIGKATRIAEFLT
GSTKTYEGEVTLGIATTTEDSDGEIVAKQKVDRIIHRSDIEEVFRQLTGEIAQTPPMYSA
VKVNGKKLYEYARAGVEVERPTRIVTIHELTLLEERDTFSGDTVSFRFRVVCSKGTYVRT
LAVMIGERLGYPAHMSDLVRTASGPFSLQDCVTFEQLERYIENGQVQSVLLPIEKALFHL
PKYEINDKVAEKVKNGAILPLPAFLQSLQGPVLMMTKQSEALALYIKHPAKPHLMKPLKV
FR

NT seq 909 nt +upstreamnt +downstreamnt
atggacggagtattgttattgcacaaaccgccgggaatgacatcgcacgattgtgttgcg
cgcattcgccgcatgttgcggaccaaaaaagtaggccatacagggacgcttgacccaaac
gtatcaggagttttgccaatttgtattggaaaggcgacgcgcatcgccgaatttttaaca
ggatcgacgaaaacatacgaaggtgaagtgacattagggatcgcgacaacaacagaagac
agcgatggcgaaatcgtcgcaaagcaaaaagtggaccgcatcattcatcgcagtgacatc
gaagaagtgttccggcagctgacgggggaaattgcgcaaacgccgccaatgtactccgcg
gtaaaagtgaacggaaaaaagctgtatgaatatgcgcgcgcgggcgttgaagtcgagcgg
ccgactcgcattgtcacgatccatgaactaacattgctggaggaacgagacacgttttct
ggtgacaccgtttcatttcgctttcgtgtcgtttgcagcaaaggcacctacgttcgcacg
ttagcggtaatgatcggcgaacgccttggctatccggcgcatatgtctgaccttgttcgc
acggcatccggtcccttttctttgcaagattgtgtcacatttgagcaattggaacgttac
atcgagaacgggcaagtacaatccgttttgcttccgatcgaaaaagcgctttttcatttg
ccgaaatatgaaataaatgataaagtagcggagaaagtaaaaaacggagcgatattgccg
cttcccgcgtttttgcaatcattgcaaggtccggtattaatgatgaccaaacaaagcgag
gcgctcgctctttatataaagcatcctgctaaacctcacttgatgaagccgctgaaagta
ttccgataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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