KEGG T01005: 456149

Pan troglodytes (chimpanzee): 456149

Entry

456149            CDS       T01005

Symbol

HIF3A

Name

(RefSeq) hypoxia-inducible factor 3-alpha isoform X13

K09096

hypoxia-inducible factor 3 alpha

Organism

ptr Pan troglodytes (chimpanzee)

Brite

KEGG Orthology (KO) [BR:ptr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptr03000]
    456149 (HIF3A)
Transcription factors [BR:ptr03000]
Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    456149 (HIF3A)

SSDB

Motif

Pfam:

PAS_11 PAS_3 HIF-1 PAS PAS_4 PAS_9 Spo0M

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

VGNC:

UniProt:

A0A2I3RUN2 A0A6D2VU47

Position

20:49220923..49267592

AA seq 600 aa
MRPAAGAARRPRCCTSWLTRCPSPAASAPTWTRPLSCASPSATCACTASAPQLELIGHSI
FDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLNLKAATWKVL
NCSGHMRAYKPPAQTSPAGSPDSEPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDM
KFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLAR
SGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRVEETGVVLSLEQTEQHSRRPIQRGAP
SQKDTPNPADSLDAPGPRILAFLHPPSLSEAALAADPRRFCSPDLRRLLGPILDGASVAA
TPSTPLATRRPQSPLSADLPDELPVGTENVHRLFTSGKDTEAVETDLDIAQDADALDLEM
LAPYISMDDDFQLNASEQLPRAYHRPLGAVPRPRARSFHGLSPPALEPSLLPRWGSDPRL
SCSSPSRGDPSASSPVAGARKRTLAQSSEDEDEGVELLGVRPPKRSPSPEHENFLLFPLS
LSFLLTGGPAPGSLQDPSTPLLNLNEPLGLRPSLLSPYSDEDTTQPGGPFQPRAGSAQAD

NT seq 1803 nt +upstreamnt +downstreamnt
atgcggcccgcagccggcgcagccaggagaccgaggtgctgtaccagctggctcacacgc
tgcccttcgcccgcggcgtcagcgcccacctggacaaggcctctatcatgcgcctcacca
tcagctacctgcgcatgcaccgcctctgcgccgcagctggagctcatcggacacagcatc
tttgatttcatccacccctgtgaccaagaggagcttcaggacgccctgaccccccagcag
accctgtccaggaggaaggtggaggcccccacggagcggtgcttctccttgcgcatgaag
agtacgctcaccagccgcgggcgcaccctcaacctcaaggcggccacctggaaggtgctg
aactgctctggacatatgagggcctacaagccccctgcacagacttctccagctgggagc
cctgactcagagcccccactgcagtgcctggtgctcatctgtgaagccatcccccaccca
ggcagcctggagcccccgctgggccgaggggccttcctcagccgccacagcctggacatg
aagttcacctactgtgacgacaggattgcagaagtggctggctatagtcccgatgacctg
atcggctgttccgcctacgagtacatccacgcgctggactccgatgcggtcagcaagagc
atccacaccttgctgagcaagggccaggcagtaacagggcagtatcgcttcctggcccgg
agtggtggctacctgtggacccagacccaggccacagtggtgtcagggggacggggcccc
cagtcggagagtatcgtctgtgtccattttttaatcagccgggtggaagagaccggagtg
gtgctgtccctggagcaaacggagcaacactctcgcagacccattcagcggggcgccccc
tctcagaaggacacccctaaccctgcggacagccttgacgcccctggcccccggatcctt
gccttcctgcacccgccttccctgagcgaggctgccctggccgctgacccccgccgtttc
tgcagccctgacctccgtcgcctcctgggacccatcctggatggggcttcagtagcggcc
actcccagcaccccgctggccacacggcgcccccaaagtcctctttcggctgatctccca
gatgaactacctgtgggcaccgagaatgtgcacagactcttcacctccgggaaagacact
gaggcagtggagacagatttagatatagctcaggatgccgatgctctggatttggagatg
ctggccccctacatctccatggatgatgacttccagctcaacgccagcgagcagctaccc
agggcctaccacagacctctgggggctgtcccccggccccgtgctcggagcttccatggc
ctgtcacctccagcccttgagccctccctgctgccccgctgggggagtgacccccggctg
agctgctccagcccttccagaggggacccctcagcatcctctcccgtggctggggctcgg
aagaggaccctggcccagagctcagaggacgaggacgagggagtggagctgctgggagtg
agacctcccaaaaggtcccccagcccagaacacgaaaactttctgctgtttcccctcagc
ctgagtttccttctgacaggaggaccagccccagggagcctgcaggaccccagcacccca
ctcctgaacctgaatgagcccctgggcctgcgcccctcactgctctctccgtactcagac
gaggacactacccagcccgggggccccttccagccaagggcaggctcagcccaggctgac
tga

All links

Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (18)   
   UniProt (2)   
   RefSeq(pep) (16)   
DNA sequence (20)   
   RefSeq(nuc) (16)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (50)   

Download RDF

DBGET integrated database retrieval system