KEGG   Pan troglodytes (chimpanzee): 456149
Entry
456149            CDS       T01005                                 

Gene name
HIF3A
Definition
(RefSeq) hypoxia-inducible factor 3-alpha isoform X15
  KO
K09096  hypoxia-inducible factor 3 alpha
Organism
ptr  Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptr03000]
    456149 (HIF3A)
Transcription factors [BR:ptr03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    456149 (HIF3A)
SSDB
Motif
Pfam: PAS_3 PAS_11 HIF-1 PAS PAS_4 PAS_9
Other DBs
NCBI-GeneID: 456149
NCBI-ProteinID: XP_001167499
Ensembl: ENSPTRG00000011180
VGNC: 7686
UniProt: A0A6D2VU47 A0A2I3RUN2
Position
19
AA seq 600 aa
MRPAAGAARRPRCCTSWLTRCPSPAASAPTWTRPLSCASPSATCACTASAPQLELIGHSI
FDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLNLKAATWKVL
NCSGHMRAYKPPAQTSPAGSPDSEPPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDM
KFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLAR
SGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRVEETGVVLSLEQTEQHSRRPIQRGAP
SQKDTPNPADSLDAPGPRILAFLHPPSLSEAALAADPRRFCSPDLRRLLGPILDGASVAA
TPSTPLATRRPQSPLSADLPDELPVGTENVHRLFTSGKDTEAVETDLDIAQDADALDLEM
LAPYISMDDDFQLNASEQLPRAYHRPLGAVPRPRARSFHGLSPPALEPSLLPRWGSDPRL
SCSSPSRGDPSASSPVAGARKRTLAQSSEDEDEGVELLGVRPPKRSPSPEHENFLLFPLS
LSFLLTGGPAPGSLQDPSTPLLNLNEPLGLRPSLLSPYSDEDTTQPGGPFQPRAGSAQAD
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgcggcccgcagccggcgcagccaggagaccgaggtgctgtaccagctggctcacacgc
tgcccttcgcccgcggcgtcagcgcccacctggacaaggcctctatcatgcgcctcacca
tcagctacctgcgcatgcaccgcctctgcgccgcagctggagctcatcggacacagcatc
tttgatttcatccacccctgtgaccaagaggagcttcaggacgccctgaccccccagcag
accctgtccaggaggaaggtggaggcccccacggagcggtgcttctccttgcgcatgaag
agtacgctcaccagccgcgggcgcaccctcaacctcaaggcggccacctggaaggtgctg
aactgctctggacatatgagggcctacaagccccctgcacagacttctccagctgggagc
cctgactcagagcccccactgcagtgcctggtgctcatctgtgaagccatcccccaccca
ggcagcctggagcccccgctgggccgaggggccttcctcagccgccacagcctggacatg
aagttcacctactgtgacgacaggattgcagaagtggctggctatagtcccgatgacctg
atcggctgttccgcctacgagtacatccacgcgctggactccgatgcggtcagcaagagc
atccacaccttgctgagcaagggccaggcagtaacagggcagtatcgcttcctggcccgg
agtggtggctacctgtggacccagacccaggccacagtggtgtcagggggacggggcccc
cagtcggagagtatcgtctgtgtccattttttaatcagccgggtggaagagaccggagtg
gtgctgtccctggagcaaacggagcaacactctcgcagacccattcagcggggcgccccc
tctcagaaggacacccctaaccctgcggacagccttgacgcccctggcccccggatcctt
gccttcctgcacccgccttccctgagcgaggctgccctggccgctgacccccgccgtttc
tgcagccctgacctccgtcgcctcctgggacccatcctggatggggcttcagtagcggcc
actcccagcaccccgctggccacacggcgcccccaaagtcctctttcggctgatctccca
gatgaactacctgtgggcaccgagaatgtgcacagactcttcacctccgggaaagacact
gaggcagtggagacagatttagatatagctcaggatgccgatgctctggatttggagatg
ctggccccctacatctccatggatgatgacttccagctcaacgccagcgagcagctaccc
agggcctaccacagacctctgggggctgtcccccggccccgtgctcggagcttccatggc
ctgtcacctccagcccttgagccctccctgctgccccgctgggggagtgacccccggctg
agctgctccagcccttccagaggggacccctcagcatcctctcccgtggctggggctcgg
aagaggaccctggcccagagctcagaggacgaggacgagggagtggagctgctgggagtg
agacctcccaaaaggtcccccagcccagaacacgaaaactttctgctgtttcccctcagc
ctgagtttccttctgacaggaggaccagccccagggagcctgcaggaccccagcacccca
ctcctgaacctgaatgagcccctgggcctgcgcccctcactgctctctccgtactcagac
gaggacactacccagcccgggggccccttccagccaagggcaggctcagcccaggctgac
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (19)   
   UniProt (2)   
   RefSeq(pep) (17)   
DNA sequence (21)   
   RefSeq(nuc) (17)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (55)   

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