KEGG   Pelosinus sp. UFO1: UFO1_0656
Entry
UFO1_0656         CDS       T03211                                 
Name
(GenBank) helicase c2
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
puf  Pelosinus sp. UFO1
Pathway
puf03022  Basal transcription factors
puf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:puf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    UFO1_0656
  09124 Replication and repair
   03420 Nucleotide excision repair
    UFO1_0656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:puf03021]
    UFO1_0656
   03400 DNA repair and recombination proteins [BR:puf03400]
    UFO1_0656
Enzymes [BR:puf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     UFO1_0656
Transcription machinery [BR:puf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     UFO1_0656
DNA repair and recombination proteins [BR:puf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     UFO1_0656
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD PDDEXK_1 ResIII Helicase_C PhoH Bac_DnaA
Other DBs
NCBI-ProteinID: AIF50211
UniProt: A0A075K7H1
Position
744562..746898
AA seq 778 aa
MTPDVVHLSVKNLVEYTLRSGDIDTRFVGTSRAVEGTKIHQKLQKAGGDKYLAEAQLKYE
IRYKEFLFLIEGRADGIIIEDQQVVIDEIKTTAVPLERIDENFNPLHWAQAKCYGLIYGE
QNNVEQLEIQLTYYNIDTDEIKRLRETVTMQELQTFFYGLLDSYLVWAKHLKEWNMLRDS
SIKKLKFPFATYRQGQRELAVTVYKTISDNKKMFIQAPTGIGKTISTLFPAVKAIGENKT
SKIFYLTAKTITRQVAEEAVNAMRGCGLAFKSITITAKDKICFKEKAICNPDHCEYAKGH
FDRVNDAIIDLFVKERAFTREVIEAYSRKYMVCPFELSLDLSMWADCIICDYNYVFDPRV
YLKRFFQTSQGDYTFLIDEAHNLVDRAREMFSAELTKSSFLKLKNIYKGHSIGKTLGKIN
TVMLGMRKECSEEGYYTQLHQPEEVYPLLWTFVNKAPALLTDNSKTEGYDALLELYFNVL
IFLKMVEFYDDHYITYVEKSSSEVTLKLFCLDPSKLLGEAVKRGKSSVFFSATLAPLDYF
CEILGGEAMDAKIAFPSPFKTENLCLLVADQISTKFKNRESSYDEIAQYIHLAIQQKTGN
YLIFFPSYHYMQEVHHVFSQLHPDTETIVQTNIMSEEERESFLDRFQPNRNRMLVGFCVL
GGIFSEGIDLKGDKLLGTVIIGVGLPQICIERNLIMEHFKKKNQLGYEYAYMYPGMNKVL
QAAGRVIRSEDDKGVVLLIDARFSNYYYKKLFPAHWRYPREVRNGSKLNALIQEFWDK
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgacaccggatgtagttcatttatcagtaaaaaacttagttgagtataccttgcgttcg
ggtgatattgatactcgctttgtgggtactagcagagcggtagaaggaaccaaaatacac
caaaagcttcaaaaggctggtggcgacaagtatttggcagaagcccaattgaaatatgaa
attagatacaaagagtttttattccttatagaaggccgtgcggacgggatcattatcgag
gatcagcaggtggtgatcgatgaaatcaaaacaacggctgttcctttggaacggatcgat
gagaattttaatcccctgcattgggctcaggcgaaatgctatggactcatttatggtgag
caaaataatgtagagcagctggaaattcaattgacgtattacaatattgatacggatgaa
ataaaaagactaagagaaaccgttactatgcaggagctgcaaactttcttttacggattg
ttggattcctatttagtatgggcaaaacatctcaaggaatggaatatgttacgagattca
tccataaaaaagctgaaatttccttttgcaacttaccgccaaggccagcgtgaattagcg
gtgaccgtatataaaaccatttcggataacaaaaaaatgtttatacaagcacccaccggg
attgggaaaaccatttctaccttgtttccggccgtcaaggctataggagagaataaaacg
agcaagattttttatttgacggccaaaaccattactcgtcaagtggctgaggaagcagta
aacgccatgcggggatgtggcttggcctttaaatcgattacgattactgcgaaagataaa
atctgttttaaggaaaaggccatctgcaacccggaccattgcgaatatgccaaggggcat
tttgatcgagtaaatgatgccattatcgatttatttgtgaaggagagggcatttacacgg
gaagtgatagaagcctattcgcgaaagtatatggtgtgtccatttgagctttccttggac
ttatccatgtgggccgactgcattatttgtgattacaattatgtttttgatcccagagtg
tatttaaaacgtttttttcagacgagtcagggtgattatacctttctaattgatgaagcg
cataatttggtggatcgagcaagagagatgttttccgcagaactaacaaaaagctctttc
ttgaagttaaagaacatctataaaggccatagtattggcaagaccctgggtaaaatcaat
acggttatgctgggaatgagaaaggagtgcagtgaagaggggtattatacacaattacat
caaccggaggaagtctatcccttgctttggacgtttgttaacaaagcgcctgctttatta
actgacaatagtaaaacagagggttatgatgcattattggaactctattttaatgtactc
atatttttgaaaatggtagagttctatgatgatcactatattacgtacgtagaaaaatcc
tcatcagaggttacgctgaaactgttttgccttgacccatccaagttgttaggggaagct
gttaaaaggggcaagtccagcgtatttttctcggcaaccctggctcccttggattatttt
tgtgaaattttaggtggtgaggcaatggatgcaaaaattgccttcccatcgccttttaag
accgagaacttatgtttattggtagccgatcagatatctacaaagttcaaaaatcgcgaa
agtagttatgatgaaattgctcaatatattcatttggctatccagcagaaaaccgggaat
tatctaatctttttcccatcctatcactacatgcaggaagtgcatcatgtcttttcacag
ttgcatcctgatactgagactatagtgcaaaccaatatcatgtctgaagaggagcgggaa
agttttttagatcggttccagccgaatcgtaatcgcatgttagttggcttctgtgtgtta
gggggaattttttccgaaggcattgacctcaaaggggataaactgttggggactgtcatt
ataggagtaggacttcctcagatatgtatagagcgcaaccttataatggaacattttaaa
aagaaaaaccaactgggatatgaatatgcctatatgtatccaggtatgaataaagtgtta
caagcagctgggcgcgtaattcgttcagaagacgataaaggcgtagtacttttgattgat
gcaaggttttccaattactattataaaaagctatttccggcacactggcgttatcctagg
gaagtgcgaaacggcagtaagctcaatgcattgattcaagaattttgggataagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (54)   

Download RDF
DBGET integrated database retrieval system