KEGG T06111: 113800163

Penaeus vannamei (Pacific white shrimp): 113800163

Entry

113800163         CDS       T06111

Name

(RefSeq) uncharacterized protein LOC113800163 isoform X1

K18409

ATP-dependent RNA helicase TDRD12 [EC:5.6.2.5]

Organism

pvm Penaeus vannamei (Pacific white shrimp)

Brite

KEGG Orthology (KO) [BR:pvm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvm03036]
    113800163
Enzymes [BR:pvm01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     113800163
Chromosome and associated proteins [BR:pvm03036]
Eukaryotic type
  Gene silencing
   piRNA pathway
    113800163

SSDB

Motif

Pfam:

TUDOR CS DEAD DrsE_2

Other DBs

NCBI-GeneID:

113800163

NCBI-ProteinID:

XP_027206688

Position

Unknown

AA seq 1738 aa
MKWPKEDEEEVAVDLAKLLVMCDFAKFATELLGRMKGRSGEENSEEDTVSNESEFATESR
EDFQGSSKLEFKTGKKLVSRSRGLTRMICHKSGSSSSTSNLESSAEGLDTSFQSSDRGRG
LMSMLDFLKCGTSTPLSVGSSSADLQLSLSNEKSGRSPKTKLSELSGEAECSELDAASTL
CLEEIPVPASSGQRSLTKGLFPTQNEEISASNKSNLSSSEKKSDGKQSLVDEICLVDSSA
IKTVPECSVKVSPQNDENFTGKSGQKEELKVESPGGRGLCLKLSISGLSDVKGVSKISDS
KESHILTKNSESMQNEKCKKEVIGMHENNRKTINYSARKVNSHLNASFISDSRDVWDREE
MGDVEEELTISLREKILPEGPCIAKLFRIFIAGESHVAEEEVVVNENMVDAILNSYIVNV
LNDLDMRATRLQAYAWPAITRGTSAIIVGGKRSGKTHGYIVPLISVILDSWLHISRRLSQ
GIGAVLVIVCKDWRNAKYAADSLVRFLPAKMSLKVITAWGGCGNEEVIDTNSQLLGGCDI
LVTTAPCLVRLLTGKTTEFAKADEEGGTKAFTSLARCCYLVFDDVDSILENCAVEVKQIL
TYWGEGKSKSDRRDFEQQLLLVASSWTKLLNSLTQTVTPLLEPIIIVADPWEAVIATRVC
TFVHKVEKIGTEQDKLVELLQDNRHGRILVFMGDDNQGRNLKILLDAVAVYSLIVTSCTT
MWVMKSIVQEWHSIANVVLIVCQEASSLLLMYELANADLIIHADIPNSIGNFKMRYAFMV
NNFSKDLNQDTINCESHILLSKESVKRLPPLVFEIERAGKIPRELQHVASKIMTTCNQDD
ALCYYLKAYGKCCIGYSCGFRHRIQKFDAESVIPRKGEVTFSVVKVINASRYLVRLLSFR
EKAGVPEFDLRDHYLRLFMAIQQYFADPENCEQLISIEPRMLCAVKCKEKWARGQIVEVD
YSRHIAMSVVFLLDEGSDVTVEQNSLYILPNHLALMPPLIVEVYLCRVQPLDFDREWTFH
ASKYIDDIFSSNINKSTFVGQIELALGSTLWLSPVTELAQAGKSKVKMESLRSRLISNGF
GISNIAHMEKLKEICKEADISLEPEDLSCELFKTTVERALDLLKDTEQIAESSKLSELNE
QNSTKNQPRMNKACTRSLEQVDSVEEDEDINNDLEKIGNLNINAEKSVSPKSEAIGTHLL
QETLPLDTDVEVGVAEIESPDWFFIQRADNYERLDELELKVQEITKHWLTDNKESLHENC
LKWEEHPCVEASRYCLAKFSDGNYYRGWVDRVTPDNTCKVFFVDHGETLIVPSSQVQSCP
SYLLDLLPAQAIPCCLASFTYPTTKLKDVKRTMEKLADSVDTWIAKVLETVESEDGKMYR
VELTDNSVEPPRQMSRELMNAHQSLKKNYREKQDREDIEDKNHVESTGLLNASCLDKEEA
MTFLQNLPNFKELSKAIRNNNAEKKVQEETVADLQNSYDLPGVLQTYNTLDKSACSSSKQ
EVESGKNENAKEKELTHHRKTEKAFDSSPENAFNQNHKNFHKAHMQQESTKPYGKAKPSK
ADTDLFNQLCLLVPPLEAVKSITRRLYPETTWSQTDSLVVINIHVPGVEHYKCRFSRNHL
AFMTVVREKFYVIEETLANEIETDSCSLKLKGMTVHIYLTKKSKCTWLLLFAEKMKRPWL
KMAYQGSSLDDEKSSVSALRKSWTDLQIDENSYGGYPAGMSDSSADSQSDEDMDDLIT

NT seq 5217 nt +upstreamnt +downstreamnt
atgaagtggccaaaggaagacgaggaagaagtagcagtggaccttgccaagctgctggta
atgtgcgactttgcaaaatttgcaactgagcttcttggcaggatgaaagggagaagtggt
gaagaaaattctgaagaagacacagttagcaatgaatcagaatttgcaacagaaagcagg
gaggactttcaaggatcatcaaagttagagtttaagactggaaaaaaactggtatcaaga
agtcgagggttaactcgaatgatttgccataaaagtggcagcagcagtagcacaagcaac
ctagaatcaagtgctgaaggacttgatacatcttttcagtcatctgaccgtggtagaggc
ctgatgagcatgttggattttttaaaatgtggaacctcaactcccctgtcagtgggaagc
tccagtgctgatttgcaattgagtttgtcaaatgaaaaatctggaagaagcccaaagaca
aagttatctgaattgtcaggtgaagctgaatgctcggaacttgatgcagcttctacttta
tgccttgaagaaattcctgttcctgcatcatcaggacaaagaagcttaacaaaagggtta
tttccaacacagaatgaagaaattagtgctagtaacaagtccaatctctcatcatcagaa
aagaaaagtgatgggaaacagtccttggtggatgagatttgtttggtagattcttcagcc
ataaagactgttcctgagtgtagtgttaaggtatcccctcagaatgatgaaaattttaca
ggaaaatctggacaaaaggaagaattaaaggtggaatcacctggtggaagaggattatgc
cttaagcttagcatatctggcttatctgatgttaaaggggtgagcaaaatttctgactct
aaagaaagtcatatattgacaaagaattcagaaagcatgcaaaatgaaaagtgtaagaag
gaagtcataggtatgcatgaaaataataggaagactattaactacagtgcaagaaaggta
aacagtcatcttaatgcctcatttatttcagactctcgagatgtttgggacagagaggaa
atgggagatgtagaagaagaattgacaatctcattaagagagaaaattttgccagagggc
ccttgcattgcaaaattattccggatatttatagctggggagtcccatgttgctgaagaa
gaagtagttgttaatgagaatatggttgatgcaatactgaatagttatatcgtaaatgta
ctaaatgatttagatatgagagcaacaagactgcaggcatatgcttggccagctataaca
cgtggtacttcagccatcattgtaggaggcaaaaggagtggcaaaactcatggttatatt
gtgcctttgatttctgttatactagactcatggctgcacataagccgtcgtctttcccaa
ggtattggggctgttttagtgattgtttgcaaagactggagaaatgctaaatatgctgct
gattctttggttaggttcttacctgcgaaaatgtcactgaaagtcatcacagcttgggga
ggttgtggcaatgaagaggtaattgataccaactcgcagttacttggtggatgtgacatt
ctggttacaacagccccatgtttggtgaggcttctaacaggcaaaactacagaatttgca
aaggccgacgaagaaggtggcaccaaagcatttacgtcccttgctaggtgttgctatctt
gtatttgatgacgttgattcaatcttggaaaattgtgcagtggaagtgaaacagatactt
acttactggggcgaaggaaagagcaaaagtgatcgaagggattttgaacagcagttactt
ttagtggcatcatcgtggaccaaattattgaattcattgacacaaacagtaactcctctt
cttgagccaattattattgttgctgatccatgggaggctgtaatagctactagagtgtgt
acctttgttcacaaagtagagaagatagggacagagcaagataaacttgttgaactttta
caagacaacagacatggaaggattttggtgtttatgggggatgataatcagggaaggaat
ctgaaaatattactggatgctgtggctgtatattccttaattgtaacaagctgtactaca
atgtgggtcatgaagtccattgtccaggaatggcactctatagcaaatgtagttttgata
gtctgccaagaggcttcatcactcctcctcatgtatgaattagcaaatgcagacctcatt
attcatgcagacataccaaactccattggtaatttcaaaatgaggtatgcctttatggtg
aataatttttcaaaagatttaaatcaagacaccataaattgtgagtctcacatattatta
tccaaagaatctgtgaaacggcttcctcctcttgtgtttgaaatagaaagggctggtaaa
attccaagagagctgcaacatgtagcatcaaaaattatgacaacttgtaaccaagatgat
gctctttgttattatttaaaagcttatggtaaatgttgtataggttacagttgtggattt
aggcatagaatacaaaagtttgatgctgagagtgtaattccaagaaagggtgaagttact
ttcagtgttgtcaaagtgataaatgcatcacgatatttagtacgcctcttgagtttcagg
gagaaggcaggggttcctgaatttgacttgagagatcactacctgaggttgttcatggcc
atacagcagtattttgctgaccctgaaaactgtgagcagttgatcagcatagaaccaaga
atgctctgtgctgtcaaatgcaaggaaaagtgggcaagaggacaaattgtagaagttgat
tactcaagacatattgccatgagtgttgtgtttctcttggatgaaggaagtgatgtaact
gtagagcaaaattccttatacatccttccgaaccatctggcactgatgccaccacttatt
gttgaggtttatctctgtagagttcaaccccttgactttgatagggaatggactttccat
gcatcaaagtacattgatgatatattcagcagcaacataaacaaaagcacttttgttgga
caaattgaactagcacttggttcaacactttggctaagccctgtgactgagttagcacag
gcaggtaaaagtaaagtaaagatggaatctctaaggtctagacttatttctaatggattt
ggaatcagcaatattgctcacatggaaaagctgaaagagatttgtaaagaagcagatata
tccttagaacctgaagacctgtcatgtgaattgtttaagacaactgtggaaagggcactg
gacttgctaaaagatacagaacaaattgcagagagcagtaagttgtctgaattaaatgag
cagaacagcaccaaaaatcagcctagaatgaacaaagcatgcactagaagcttagaacaa
gttgattctgttgaagaagacgaggatatcaataatgatcttgagaaaataggaaactta
aatataaatgcggaaaagtcagtcagtcctaaaagtgaagctataggtactcatttgtta
caagaaactttgcccttggatactgatgtggaagttggtgttgcagaaatagaatctcct
gactggttctttattcaacgtgcagataattatgaaaggctggatgaacttgagttaaag
gtccaagagataaccaagcattggctaacagacaataaagagagtcttcatgaaaactgc
ttgaaatgggaggagcacccatgtgttgaggcttctagatactgtctggcaaagttttct
gatggcaattactaccgtggctgggtggacagagttacaccagataacacctgtaaggtc
ttttttgtggaccatggagagaccctgattgtaccttctagtcaggttcagtcatgtcca
tcatatcttttggaccttctccctgcacaagccattccatgttgtttggccagttttact
tatccaacaacaaaattaaaagatgtgaagaggactatggagaagttggctgattctgtt
gacacatggatagcaaaggttttagaaacagttgaatcagaggatgggaaaatgtacagg
gtagagttaactgataactcagtggaaccaccaaggcagatgtcaagagagctcatgaat
gcacaccaatcattgaagaagaattatagggaaaaacaggacagggaagatattgaagat
aaaaatcatgtggagtcaacaggattgcttaatgcttcatgcttagacaaagaggaagca
atgacgttcttacagaatttgcccaatttcaaggaattgtcaaaagcaatcaggaataat
aatgcagaaaaaaaagtccaagaagaaactgtggcagaccttcagaattcatatgatttg
cctggagttttacaaacttataatacccttgacaagtcagcttgcagttccagcaaacaa
gaagtggagtcagggaaaaatgaaaatgcaaaagagaaagaactgacacatcacagaaaa
acagaaaaggcctttgattcatcaccagaaaatgcctttaatcagaaccataaaaatttt
cacaaggcacatatgcaacaagagagcactaaaccttatggaaaagcaaaaccgtcaaag
gctgatacagacttgttcaaccagctatgtctacttgtgccaccgcttgaggctgtaaaa
agcattacacgtaggttatatcctgagacaacctggagtcagacggacagcttggttgta
atcaatatacacgtgccaggagttgagcactacaagtgtcggttttcaaggaatcatttg
gcctttatgactgttgtcagagaaaaattctatgttattgaagagactttggcaaatgaa
attgagacagattcatgttctctcaagttaaaaggcatgactgtgcatatttacctgacc
aagaaatcaaaatgtacatggctcctcctttttgctgagaagatgaaacgtccatggttg
aagatggcctaccaaggctcaagcttagacgatgaaaagtcatcagtatctgctctcaga
aaatcatggacagacttgcagattgatgagaacagctatggaggatacccagctggcatg
agcgacagttcagcagatagtcagtcagatgaagatatggatgacttaatcacttga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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