KEGG   Penaeus vannamei (Pacific white shrimp): 113809946
Entry
113809946         CDS       T06111                                 
Name
(RefSeq) ATP-dependent RNA helicase DHX30-like
  KO
K13185  ATP-dependent RNA helicase DHX30 [EC:5.6.2.6]
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvm03041]
    113809946
   03029 Mitochondrial biogenesis [BR:pvm03029]
    113809946
Enzymes [BR:pvm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     113809946
Spliceosome [BR:pvm03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    113809946
Mitochondrial biogenesis [BR:pvm03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    113809946
SSDB
Motif
Pfam: Helicase_C DEAD HA2_C HTH_11 AAA_19 nSTAND3 AAA_22 AAA_30 NACHT RsgA_GTPase AAA_34 ABC_tran
Other DBs
NCBI-GeneID: 113809946
NCBI-ProteinID: XP_027217461
Position
Unknown
AA seq 1018 aa
MADAHFMQRQKNGILQVFPNVPSTIKNMYYNLSTNLNPSYRYEQSVSAVGRVNNQLVFQC
SSKIKWPRPLTFQGYGFSKKNAELVAMLKILEMLHEEKYIGENGYPITISSEEQEKIRKE
WNSPVSIRLPVSLMEEGFSIIQNFHEEIKPQMDMKTDPTAVITAGLTEESDDEFGVERAT
EDIDEDDSFCWEEDKENNYILDMFTGRQYIEPSREENIHRSQKMLQLLQAREMSKGTQPQ
ASLPMSHYRDALQTALDKSRVVVIAGDTGCGKSTQVPQMIIDDWIRKGNGANCNILVTQP
RRISAISLAKRVAKERREKIGESVGFHVRLHYQRLREQGGVMFCTTGMLLQGLHSNPTLK
GVSHVIVDEVHERSVQTDLLLIILRRLLRSSDDLRIIFMSASLSTVQLQKYFEAEEATVI
EVPGTLYPLTRHYLPCALNELQINSRHYQLDSLMEPGSQPFINYDLVVDVIKSIQNSRPP
GAILCFLPGWQDIRTVQTRLTEEKELESMLWVLPLHSRLSSSDQEQIFEEAAEGRRKVVL
ATNLAETSLTVQDVVYVVDTGCHKEQRYDPKKNLSILANHWISRANSQQRAGRAGRVQPG
EVFHLYSSKVHMDMGRFPVPEIMRIPLEHVILQCKAHCGDENALSFLSEGLSVPSRRLIS
KAVSTLEDLGMLEILDQGATEKLTALGRRVVHFSTPPHLSKALVYASVFKCLNPVLKITA
SLTSGRDIFLNNIENRAETRAVKTQMNNTSDLLAIARLCSAWEELDHYKDKIDFCNDNNL
NHRSIMYNLGISRVYADHLYDGFLLNKEDISSPFSSWNAFSSNNQLVLGVLLAGVGRILH
LQRGVLSKGIFRSDSFVIKTLDNKQVHTGSDCVLHQLPKDQDMSCHLLCVNLTRDEVSRR
TIARDLSLLQPLTVAIFTEQKLVAEESEDGWQISVDGKEQLSFHLDERTAKFIFQLRNIM
KETVSYIVETRGLDSEVPPPHEIETFCDTLLSFINKLFETSQNFKKFQKLEEKEDLGF
NT seq 3057 nt   +upstreamnt  +downstreamnt
atggcagatgcccattttatgcagagacaaaaaaatggcattctccaagtgtttccaaat
gtgccatctactataaagaacatgtactacaatctttctaccaaccttaacccatcatat
aggtatgagcagtcagtatcagcagtcgggcgagtgaacaaccagctggtgtttcagtgt
tcttccaaaataaagtggcccagacccttgacttttcagggatatggatttagcaagaaa
aatgctgaattggtagccatgcttaagattttggagatgctacatgaagagaaatatatt
ggtgaaaatggctatccaataacaatttcatcagaagagcaggaaaagataagaaaagag
tggaactctccagtgtcaataagattaccagtatccttaatggaagaaggatttagtatt
atacaaaatttccacgaggagataaagccacagatggacatgaagactgacccaacagct
gtcatcacagctggcttaacagaagagtctgatgatgaatttggagtagaaagagccaca
gaggatattgatgaagatgattcattttgctgggaggaagataaagaaaataattacatt
ctggacatgttcactggacgtcagtacattgagccatccagagaggaaaatattcaccga
agccagaaaatgcttcagcttcttcaggcaagagagatgtcaaagggtacacagcctcag
gcatcccttcctatgtcacattacagggatgccctgcaaactgcattggacaagagcaga
gtagttgtcattgctggagacacaggatgtggcaagagtacacaggttccacagatgatt
atagatgattggattaggaagggcaatggtgctaattgcaatatcttagtcactcaacca
cggcgtatatctgcaatatctcttgctaaacgagttgcaaaggagagaagagaaaagata
ggtgagagtgtaggatttcatgtccgcttgcattaccagcgacttcgagaacagggaggt
gttatgttctgcacaacaggtatgcttctccagggtctacactccaatccaactcttaag
ggagtatcgcatgtgatagtggatgaagttcatgaacgctcagtacagacagatttgctt
cttataatactgcgtcgtttgttaaggagctcagatgacctacgtattatctttatgagt
gcttcactaagcactgtacagttgcagaaatattttgaggcagaagaggcaactgtaatt
gaagtccctggaacactgtatcctctcactcgccactatcttccatgtgcattaaatgaa
cttcagatcaactcaagacactaccagcttgactcactgatggaaccaggttcacaaccc
tttatcaactatgatctggttgttgatgtgattaaatctatacagaactccaggccacct
ggtgctattctgtgcttcttacctggatggcaggatatccggacagttcagacacggcta
acagaagagaaggagttagaaagtatgttgtgggtgctgccccttcattcaagattgtcc
tcaagtgaccaagagcagatttttgaagaagcggcagaaggtcgtcgcaaagttgtattg
gctacaaatttggctgagactagcttgacagtccaagatgtagtatatgttgtggacaca
ggttgccacaaagagcaaagatatgacccaaagaaaaatttaagcatactagctaaccac
tggatctcgcgcgctaatagccagcagcgggctggaagggcaggacgggttcagccaggg
gaagtgttccacctctactcctcaaaggtgcatatggacatgggccgctttcctgtccct
gagatcatgaggatccctctcgagcatgttattctccagtgcaaggcacattgtggagat
gagaatgctcttagctttctctcagaaggactgagtgttccatcacgacggctcatttcc
aaggctgtttccacacttgaggacctaggaatgttggaaatccttgatcaaggagccaca
gagaaactcacagcacttgggcgtcgtgttgtgcacttttccactcctcctcatttatcg
aaggcacttgtttatgcttcagtattcaagtgtctgaatccggtcctcaaaattactgcc
agtctgacaagtggccgagacattttcctgaataacattgagaaccgagcagaaacacga
gctgtaaaaacacaaatgaataacaccagtgatcttttagcaatagcacggctgtgctca
gcctgggaggagctggaccattataaagataaaattgatttctgcaatgacaacaacctc
aaccatcgaagcatcatgtataatttaggcatctcacgagtgtatgcagatcacctatat
gatggatttctcctgaataaggaagacatcagctctcccttttcatcttggaatgccttt
agcagtaacaaccagctggtcctgggagttctactagctggtgttggccgtattctgcac
ctccagagaggagtgttgtctaaggggatctttcgcagtgattcttttgttatcaagact
ttagataataagcaggtacacactggaagtgactgtgtgctccatcagctcccaaaggac
caggacatgtcttgccaccttctgtgtgtcaatctcactagggatgaagtttcaagaaga
actattgcaagagacctgtctctgttgcagcctctaacagtggcaatcttcactgaacaa
aagcttgttgcagaggaatcagaagatggttggcagattagtgttgatggaaaagagcag
ctgtcattccacctcgatgaaagaacagctaagttcattttccagctacggaatattatg
aaagagacagtgagctacatagttgagaccagagggttggacagtgaagtgcctcctcca
catgaaattgaaaccttctgtgatacccttttgagttttattaacaaattgtttgaaacc
agtcaaaactttaagaaattccagaagcttgaagaaaaggaggacttaggtttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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