KEGG T03446: 103949123

Pyrus x bretschneideri (Chinese white pear): 103949123

Entry

103949123         CDS       T03446

Name

(RefSeq) dicer-like protein 4

K11592

endoribonuclease Dicer [EC:3.1.26.-]

Organism

pxb Pyrus x bretschneideri (Chinese white pear)

Brite

KEGG Orthology (KO) [BR:pxb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pxb03036]
    103949123
Chromosome and associated proteins [BR:pxb03036]
Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    103949123
   microRNA pathway
    RISC loading complex
     103949123

SSDB

Motif

Pfam:

Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer DEAD Helicase_C ResIII DND1_DSRM dsrm PAZ GA-like nSTAND3

Other DBs

NCBI-GeneID:

103949123

NCBI-ProteinID:

XP_009358497

Position

Unknown

AA seq 1624 aa
MDGAGGSSPPSDQGGSSTDRVKSGHGASKPEKDPRKDARKYQLDLCKKALEENVIVYLGT
GCGKTRIAVMLIYEMRHLIRKPQKSVCVFLAPTVALVQQQARVIEDSLGFDVGIYCGGSN
QLKYHQDWEKEIEQYEVFVMIPEVLLRNLCHCFIKMESISLLIFDECHHAQVQSNHAYAE
IMKLFYDANTTKRPRIFGMTASPVVGQGASSRENLSKCINSLESILDAKVYSVDKKELDC
FVSSPVITVYDYGPVISDASSPYITYYTKLEQMKHQCIAELGKKTNDHQSLRSTKKLLNR
MHESIRFCLENLGLWGALKASHVLLSGDHLERSELIEEEGNNGDDSLCVRYLTQVDGILT
TDCLKDSIADDLSSIDILKEPFFSRKLLRLIGVLSSFRLQQNMKCIIFVNRIVTASSLSY
ILQRLKFLASWKCDFLVGVNSRLMNMSRKKMKIILDKFRSGELNLLVATKVGEEGLDIQT
CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVNSGNQKERDLIETFRQDEAHMNMEIA
FRTSSETFVGSADRVYKVDSSGASISSGYSISLLHKYCSKLPHDEYFDPNPKFFFFDDLG
GTVCQIILPSNAPIHQIVGTQQSSMEDAKKDVCLKAIEELHKLGALNDFLLPQQDNANEV
ELVSSDSDSTEDEDPRGELHKMLVPDALKEPWSSSEDLVSLSSYYIKFNPVPEDRIYRSF
GLFVKAPLPVEAETMELDLHLAHSRSVITKLVPSGFANFGKDEIVLAQNFQEMFLKLVLD
RMKFVSDYVPLGRHDRSSSSTFYLLLPVMLGNDDKIASIDWGTIRKCLSSPVFRAPGDAT
EKVPSLDIRLASGYKSIRDIQNSLVYVPYKKSFYFITDVVREKNGYSQYKNSGTLTYVDH
LIQKFGIHLKYPEQQLLHAKPLFSLHNLLHNRRQEDSGPTQLEEYFISLPPELCELKVIG
FSKDIGSSISLLPSLMHRLENLLVAIELKHVLAASFPEGGAVTAKRVLEALTTEKCQERL
SLERLEILGDAFLKFAVGRHFFLRHGSLDEGGLTRKRSNVVNNSNLFKLATRSNLQVYIR
DQPFEPSQFFALGRPCPRICNEETVGAIHFHDLSGEVNHTSASEVRCSKGHHWLYKKTIA
DVVEALVGAFVVDSGFIAATAFLKWIGIQVDFEPSQVTEACIASSRYIPLSACMNIAALE
NLLGYKFLHRGLLLQAFVHPSYNKHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQ
LTDLRSVSVNNKAFANVAVDRSFHKFLISDSSSLSEAIESYVGFIETAASDRGLLDGPKC
PKALGDLVESCLGAILLDTGFNLNRVWEIMLSFLKPIMSFSSLQLSPIRELRELCQAHSW
GLEFVPTKMGKKYSVCATVNGNNVCVSASTTSLNKKDGIRICAQLIFDKLKAQGNIPMTN
SLEEVLKSSREMEAKLIGYDETPIDVVLLDASGFDNLNVQEVSRRNFNSQGHPINQERNG
HSSCRKPVRQSPSSSGAVKMRPNKTRENSKNDVNSQSGGTHTATSRSRLYEVCAANYWET
PLFECCNEEGPSHLKSFTYKAVVKIEEDPDTLLECFGEPNMKKKAAAESAAEGALWYLKN
RGFM

NT seq 4875 nt +upstreamnt +downstreamnt
atggacggcgctggcggaagttctccaccgtctgatcagggcggttcgtctaccgaccgg
gtcaagtccggtcatggagcttcgaagccggagaaagacccgaggaaggacgccagaaag
tatcaattggacctgtgcaagaaagctttggaggagaacgtaattgtgtatctagggact
ggttgtgggaaaacccgcatagcggtcatgcttatatacgagatgcgccacttgatccgc
aaaccccaaaagagcgtatgcgtgtttcttgcacccacagtggctctggttcaacagcaa
gctagggttatagaagattcccttggtttcgatgttgggatttattgtggaggctctaac
caattgaagtatcaccaagactgggaaaaagagattgaacaatatgaggtttttgttatg
atccctgaagtactgctacgaaacttatgtcactgtttcattaagatggagtcaatttct
ttgttgatatttgatgaatgtcatcatgctcaagtccaaagcaaccatgcctatgcagaa
attatgaaattgttttacgatgctaataccacaaaacgtcctcgtatatttggcatgacg
gcatctccagttgtagggcaaggtgcttcgagtcgggaaaacttatcaaaatgcatcaat
agtcttgaaagtatacttgatgctaaggtttattcagttgataagaaagaattggattgt
tttgtctcatctcctgtcatcacagtgtatgattatggtccagttataagcgacgcatcc
agcccctatatcacttactacactaaacttgagcagatgaaacaccagtgtatagcagaa
cttggtaagaagacaaatgatcaccaaagtctaaggagtacaaagaaactgttgaacaga
atgcatgaaagtatacggttttgcttggaaaatcttggcctttggggagcattaaaagct
agtcatgttcttttgagtggcgatcacttggaaaggagtgaactaatagaggaggaagga
aataatggtgatgattctctatgtgttagatatctgactcaggttgatggcatccttact
actgactgcttaaaagattccattgctgatgatctatcttctatagatattttaaaggag
ccatttttctcaagaaagctcttacgtcttattggagttctttcatcctttaggttgcaa
caaaatatgaaatgcataatttttgtcaatagaattgttactgcgagttccttgtcttac
atactacaacgcctcaagtttctagcatcttggaagtgtgattttcttgtaggagtcaac
tctagactgatgaatatgtcaaggaagaagatgaaaatcattcttgataagttccgatct
ggagagttgaatctattggttgcaactaaagttggtgaagaaggactagatattcagacg
tgctgccttgtgatacgatttgatcttccagaaactgttgctagctttatacaatcacga
ggtcgtgcacggatgcctcagtctgaatatgcatttttggtaaacagtggcaaccagaaa
gagagagatttaatagaaaccttcagacaagatgaagctcacatgaacatggaaattgct
ttcagaacatccagtgagacatttgttggttcggcggatagggtgtataaagtcgattct
tctggtgcttccatcagttctggatatagcatctcattgttacacaagtattgttcaaag
cttccacatgatgagtactttgaccccaatccaaagttcttttttttcgatgacttgggg
ggaactgtttgtcagataattttaccttccaatgcgccaatccatcaaattgtcggaaca
caacaatcttcgatggaagatgccaaaaaagatgtttgtctaaaggccattgaagaattg
cataaattaggtgccttaaatgactttctcttaccacagcaagacaatgcaaatgaggtg
gagttggtgtcttctgattctgacagtaccgaagatgaggatccaagaggagaactacat
aaaatgctagttcctgatgcactaaaagagccatggagtagttcggaggaccttgtttcc
ctcagctcatactatataaaatttaaccctgttcctgaggacaggatctatagaagcttt
ggtctatttgtcaaggctcctctcccagttgaagccgaaacaatggaacttgatcttcat
ctcgctcatagtagatctgtgattacaaagttggtcccttcaggatttgccaattttggc
aaagatgagatcgtgctggcacaaaattttcaagaaatgttcctcaagctcgtccttgac
cgaatgaaatttgtttctgattatgttccattgggaaggcatgatagatcaagctcatca
accttctacctgttgcttccagtaatgttgggtaacgatgataagatagcaagcattgat
tgggggactatcagaaaatgtttatcatccccagtgttcagggctccaggagatgctaca
gagaaagttccttctttggatattcggcttgcatcaggttacaaaagcataagggatatt
cagaatagtttagtctatgtcccatataagaaatcattttacttcatcactgatgttgtt
cgagaaaagaatggctacagccaatataaaaactcaggcactttaacctatgtggaccat
ttaattcaaaaatttggcattcaccttaaataccctgagcaacagcttctgcatgccaaa
ccacttttctctttacacaacttgctacacaaccgaaggcaagaagattcgggaccgaca
caactagaggagtattttattagcttgccacctgagctttgcgagttgaaggtaatagga
ttttccaaagatattgggagttcaatatctttgttaccatcactcatgcaccggctggaa
aacctgcttgtcgccatcgaactgaagcatgtattagctgcttcattcccagagggaggt
gcggttactgccaagagagttctagaggcactcacaactgagaagtgccaggagcggctt
tcccttgaaaggcttgaaatacttggtgatgctttccttaagtttgctgttgggcgacac
ttcttccttcggcatggtagccttgatgaagggggactgacaaggaagcgttctaatgtg
gtaaacaattccaatttattcaagctagccacgagaagcaacttacaggtatacatacgg
gatcaaccatttgaaccctctcagttctttgctttaggccgaccttgcccaagaatttgt
aacgaggagacagtaggagctattcattttcatgacttatccggtgaagtaaatcacaca
agtgctagtgaggtcagatgcagcaagggtcaccattggttatataagaaaaccattgct
gatgttgttgaagcccttgttggagcattcgtagttgacagtggctttatagctgcaact
gcatttcttaagtggattggcatacaagtagacttcgaaccatcacaagttactgaagca
tgcatagcaagctctagatacatcccactttctgcttgcatgaacattgctgcccttgaa
aatttattagggtataagtttctccacagaggtctgctcttacaggcatttgtacatcct
tcttacaacaagcatggaggaggctgctatcagagattggagtttcttggggatgccgtc
ttggattacttgatcacctcatacctgtattcagtttatccaaagttgaagcctggtcaa
ttaacggatttgagatcagtgtctgtgaataataaagcctttgctaatgttgcagtagat
cggtccttccacaagtttctaatcagtgattcctctagcctttcagaggcgatagaaagt
tatgtgggcttcattgaaacagctgcatcagatagaggtctgcttgatgggcccaaatgt
ccaaaggctctgggcgacttggtagagtcctgtctgggcgcaattcttcttgatacaggg
ttcaacttgaatcgtgtttgggagataatgctatcctttctgaaaccaattatgagcttt
tccagcttgcaacttagtcctattagggaactacgtgaactttgccaagctcattcatgg
ggtcttgagtttgtaccaacaaaaatgggtaaaaagtattcagtttgtgcaacagtgaat
gggaataatgtttgtgtatctgcttctacgaccagcttgaacaaaaaggatggaataaga
atttgtgcacaactgattttcgacaagttgaaggctcaaggcaacatacctatgactaac
tcattggaggaagtcttaaagtcaagcagggagatggaagccaaacttattggatatgat
gaaacaccaatagatgttgtgcttcttgatgcaagtggatttgataacttaaatgtacaa
gaagtttcccgccgaaattttaactcccaagggcatcctatcaatcaagagagaaacggt
cactcttcctgcagaaaacctgtacgacaatccccatcttcatctggagcagtcaaaatg
cggcccaataagaccagggaaaattctaagaatgatgttaactcgcaatccggaggtaca
cacacggcaacatcaagatctcgtttgtatgaagtttgtgccgctaactactgggaaact
cccttatttgagtgctgcaatgaagaaggaccaagccacttaaaatcgttcacctacaag
gctgtagtaaagatagaagaagatccagatacgctgttagagtgcttcggagaacctaat
atgaaaaagaaagcagctgcagagagtgcggcagaaggggcactttggtacttgaaaaac
agaggttttatgtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (26)   

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