KEGG   Pyrus x bretschneideri (Chinese white pear): 103950188
Entry
103950188         CDS       T03446                                 
Name
(RefSeq) THO complex subunit 5B
  KO
K13174  THO complex subunit 5
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103950188
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxb03019]
    103950188
   03041 Spliceosome [BR:pxb03041]
    103950188
Messenger RNA biogenesis [BR:pxb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103950188
Spliceosome [BR:pxb03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103950188
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 103950188
NCBI-ProteinID: XP_009359637
Position
Unknown
AA seq 813 aa
MEDDEIEEGMLVEEDAAPPPPKKPGKSPYEMLQEGKFSVEDIVTKMLTIKKEAKPKSELR
ELVTQMFLNFVTLRQANRSILLEEDRVKAETESAKAPVDLTTLQLHNLMYEKSHYVKAIK
ACKDFKSKYPDIELVPEEEFFRDAPADIKEPTLSNDAGHDIMLKRLNFELHQRKELCKHH
EKLEIHKKGLLETIANRKKFLSSLPSHLKSLKKASLPVQNQLGLQHTKKLKQHHAAELLP
PPLYVVYSQFMAQKEAFDEQIELDIVGSVKDAQAFAHKQANKETGISTNVETSREDDALD
EEDDGQRRRKRPKRAPVKQNLEQSGLYQVHPLKIILHIYDDEVSDPKSAKLITLKFEFLL
KLNVVCVGIEGSNDAAENNTLCNLFPDDTGLELPHQSAKLVVGDTLAFDEKRTSRPYKWA
QHLSGIDFLPEVAPLLAAPETPSGDTAKSDAVISGLSLYRQQNRIQTVVRRIRSRRKAQM
ALVEQIESLMKLKWPSVSCESVPWALHTPLCKLHGFSPVGPPPNVASSLPVLDKEQGQEP
MDVDLVGRSGSSKEELESVREDGELPSLVPAASIANVSKLAHHKGASLDHSRRPSLLSKT
PPISKAKSLSYKKPDEDLDLLLDTESDQDEPARVLEEENLASVECFEMAGTSWVDFGVRE
YCLVLTRRVDRDKRNMKLEAKIKISMEYPLRPPYFALSLSTISGENSKESDDYECFNELR
AMEAEVNLHMVKMLPQSEENNILAHQVCCVAMLFDYYMDEASPSSEKRRSTSVVDVGLCK
PVSGQIVARSFRGRDRRKMISWKDMECTSGYPY
NT seq 2442 nt   +upstreamnt  +downstreamnt
atggaagacgacgagatagaggaggggatgctggtggaggaagacgcagctccgccgccg
ccgaagaagccgggaaaatccccgtacgaaatgcttcaggagggcaagttctcagtggag
gacatagtgacgaagatgctcaccatcaaaaaagaagccaagcctaaatcggaactccgc
gagctcgtcactcagatgtttctcaacttcgtcaccctccgccaggcgaatcgttcgatc
ttgctcgaggaggaccgcgtgaaagcggagacggagagtgcgaaggcgccggtggacttg
acgacgctgcagctccacaatctgatgtacgagaagagccactacgtgaaggccattaaa
gcttgcaaggacttcaagtctaagtacccggacattgagctggtcccggaagaagagttc
tttcgcgacgccccggccgatatcaaggagccgacgctgtcgaatgatgcagggcacgac
attatgctcaagaggctcaatttcgagctccaccagcgcaaggagctctgcaagcatcat
gagaagcttgagattcataagaagggtctgttggagacgattgccaatcggaagaagttc
ttgtccagtcttccttcgcacttaaagtccctaaagaaggcttctttgccggtgcagaac
caattggggcttcagcataccaagaagctcaagcagcatcacgctgcagagttgcttccg
ccgcctctgtatgtagtttactcgcagttcatggcgcagaaggaggcatttgatgaacag
attgagttggatatagtggggagtgtgaaggacgctcaagcttttgcccataagcaagca
aataaggagactggcatttcgaccaatgtagagactagtagggaggatgatgcactggat
gaggaagatgatgggcagagaaggagaaagcggccaaagagggctccagtcaagcaaaac
cttgaacagtctggactgtatcaagttcatccgctgaaaatcatccttcatatttatgat
gatgaggtttctgatcccaagtctgcaaaacttatcaccctcaagtttgagtttttgttg
aagttgaatgtggtatgtgttggaattgaaggatccaatgatgcagcggaaaataacacc
ttatgcaacctattcccagatgacactggccttgagcttccccatcagtcagccaagctc
gttgtgggtgatactcttgcatttgatgaaaagagaacttcccgtccgtataagtgggcc
cagcatttatcgggaattgatttcttgcctgaggtggcacccttgcttgctgcccctgaa
actccaagtggtgatacagctaaaagtgatgctgttatatctggtctgtcactttaccgc
cagcagaaccgaatacagacagttgtgcgaagaattcgctctcggagaaaagctcagatg
gctcttgtggaacagattgaatcacttatgaagcttaaatggccgtctgtgtcttgtgaa
agtgttccatgggctttgcatacccctttgtgcaaattgcatggtttttcacctgttggg
cctccacctaatgtggcatcatctttgcctgtcctagataaggagcagggtcaggagcct
atggatgtcgatttggttggacgatctggttcttcaaaggaagagctggagagtgtcaga
gaagatggggaacttccatctttagttccagctgcatccattgccaatgttagtaaactt
gctcaccataaaggagctagtcttgaccactccagacggccgtccttactttcaaaaaca
cctccaatcagcaaggccaaatcgctaagttataagaaaccggatgaagatttagatctt
cttctggatacagagagtgatcaggacgaacctgcacgtgtgctagaggaagaaaattta
gcgtctgttgaatgctttgagatggctggaacgtcatgggtggattttggggtcagagaa
tattgtcttgttttaaccaggagagttgacagggataagaggaatatgaagttagaagcc
aagattaagatcagcatggagtatccattaaggcctccctattttgcactcagtcttagc
actatatctggagaaaactctaaagagagcgatgactatgagtgcttcaatgaacttcgt
gcaatggaagcagaggtcaatctgcacatggtgaagatgttacctcaaagtgaagaaaat
aatatcttagctcatcaggtttgttgtgtggcaatgttattcgactattacatggacgaa
gcatccccatcttctgaaaagagacggagcacttctgttgttgatgttggcttgtgcaag
cctgtcagtggtcagattgttgccagatcatttagaggaagggatcgcaggaagatgata
tcctggaaggacatggaatgcacttcaggctatccttactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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