KEGG   Quercus suber (cork oak): 111997513
Entry
111997513         CDS       T05868                                 
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111997513
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsu03019]
    111997513
   03016 Transfer RNA biogenesis [BR:qsu03016]
    111997513
Enzymes [BR:qsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     111997513
Messenger RNA biogenesis [BR:qsu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     111997513
Transfer RNA biogenesis [BR:qsu03016]
 Prokaryotic type
  tRNA degradation factors
   111997513
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 Urease_gamma
Other DBs
NCBI-GeneID: 111997513
NCBI-ProteinID: XP_065621232
Position
Unknown
AA seq 1003 aa
MASMARRAHPLLSNIPHFLTWRSLGFRTICCGRLGFATQSQPDPDPVVAGTKVLETFREE
FEIGSRLISFETGKIARFANGSVVMGMDETKVLSTVASAKGDAARDFLPLTVDYQEKQFA
QGVIPNTFMRREGAPKERELLCGRIIDRPIRPLFPAGFYHEVQVMASVLSSDGTQDPDVM
AANATSAALMLSDIPWGGPIGVIRIGRISGKFIVNPTMDELSLSDLNLIYACTKDKTLMI
DVQAREISEKDLEAGLRLAHPEAVKYLEPQIRLAAKAGKHKKEYKLSLISDRTLEKVGNL
AEAPIESVFTDPSYGKFERGEALDKITQDVRRSLEEECDEESLKVLPKTVDTVRKKVVRK
RIINEGFRVDGRQLDEVRPVYCEAGSFPILHGSSIFNRGDTQVLCTVTLGAPGDAQRLES
LVGPPTKRFMLHYSFPPFSINEVGKRVGLNRREVGHGTLAEKALLAVLPPEDDFPYTVRV
NSEVMASDGSTSMATVCGGSMALMDAGIPLREHVAGVSVGLVSEVDPATGMIKDYRILTD
ILGLEDHLGDMDFKIAGTRKGVTAIQLDIKPAGIPLDIICECLEPAYKGRLQILDHMERE
INAPRTQNERNSPRLATLKFSNDALRRLIGPLGALKRKIEEETGARMSVSDGTLTIVAKN
QAVMEKVLEKVDFIVGREIEIGGIYKGVVSSIKEYGAFVEFNGGQQGLLHISELSHEPVS
RISDVVSVGQQLSLMCIGQDVRGNIKLSLKATSPRPGADTNNVVDGSVPPVKEEPNIWAS
VGDVSNEQENENSPLEEFSGSKSEMSGVNPSTSSISPILIRSAAECEEEEKSAALSQNPK
SATSNVGASKSNCKSKKSPPEDHANESPFSNSGLFPTKNVKKSKRVLQKEGEIDFNSILK
SLDADGNKHNSSHTHTMNGSTDQEDEVEAPITAKKLKIGTKVTAKVYQIRAHGLVLDLGG
GLRGMYRFETDGKEDFEVGDELRVECSSFSSKGIPVVSLVDDQ
NT seq 3012 nt   +upstreamnt  +downstreamnt
atggcgtccatggcgagaagagcccacccgctcctctccaacattccacacttcctcaca
tggcggtccctcggcttccgcaccatttgctgcggtcgcctcggcttcgccacccagtct
cagcccgacccggacccggtcgtcgcaggcaccaaggtcctcgagacattcagggaggaa
ttcgagattggctcgcgactcatctccttcgagactggtaagatcgctcgcttcgctaat
ggctccgtcgttatgggcatggacgagaccaaagtcctgtccaccgtcgcctcagccaaa
ggcgacgccgctcgcgatttcttgccactcacagttgattatcaagagaagcaatttgcc
caaggtgttattccaaatacgttcatgaggagggagggtgctccaaaagagcgtgaactt
ttatgtggtcgtattattgatcgacccatacgacccctatttcctgctggattttaccat
gaggttcaggtaatggcaagtgtgctttcctcggatggaacacaagatcctgatgtaatg
gcagctaatgcaacatctgctgctcttatgttatcagatattccctgggggggccccatt
ggagtgatacgcatagggaggatttctgggaaatttattgttaacccaacgatggatgag
cttagcttaagtgatcttaatttaatatatgcctgtacaaaggacaaaactttaatgatt
gatgtgcaagctcgtgagatctcagagaaagatctagaagctgggttaagactagctcat
cctgaggcagtgaaatatctcgaacctcaaatcagactggctgctaaagctggtaagcat
aagaaagaatataaattgtctttgatttcggatagaacgttggagaaagttggtaatttg
gctgaagcacccatagagtctgtttttacggatccttcatacggcaagtttgaacgtgga
gaggctttagataagattacacaggatgttaggagatcacttgaagaagaatgtgatgaa
gaaagtctgaaagttctacccaagacagtagatacagtgaggaaaaaggttgtacgcaaa
aggattataaatgaaggatttagagttgatgggaggcaacttgatgaagtgaggcctgta
tattgtgaagctggtagttttcctatactgcatgggtcatcaatttttaatcgtggagat
actcaggttctctgtactgtaacactcggagcacctggagatgctcaacgcttggagtcc
cttgtcggtcccccaacaaagcgcttcatgcttcactacagctttccaccattctcaatt
aatgaagttggcaaacgtgttggcctgaacaggcgtgaagttgggcatggaactcttgct
gagaaagctctgcttgctgtgttacctcctgaagatgatttcccctatacggtccgtgtc
aactcagaggtcatggcctcagatggttcaacatcaatggctactgtctgtggaggtagt
atggcattgatggatgctggcattccattacgcgaacatgtagctggtgtttcagtgggt
cttgttagtgaggttgacccagcaactggaatgattaaggattatcgtatattgactgat
attttgggcctggaagatcatctaggtgacatggacttcaaaattgccggcacacgaaaa
ggagttacagcaattcagttggatataaaacctgctggaattcctttagatatcatttgt
gagtgtttagagcctgcatataaaggtcgtcttcaaattcttgaccatatggagcgggag
atcaatgcaccacgtactcagaatgaaaggaattctcctcgtttagctaccctgaaattc
agcaatgatgccctacgccgcttgattgggcctctaggagctttaaaaagaaagattgaa
gaggaaacaggtgcacgaatgtctgtaagcgatggaacacttaccatagttgctaagaat
caagctgtaatggaaaaagtattagaaaaggttgattttattgtaggccgtgaaattgaa
atcggggggatctataaaggtgttgtaagttcaataaaagaatatggtgcatttgtggag
ttcaatggtggccagcaaggccttctacacatttctgagctgtcacatgaaccggtctct
cggatatcagatgtggtttctgttggccagcagctttctttgatgtgcataggacaggat
gttcgtggtaatattaaattatcccttaaagctacttcacctcgaccaggagccgacaca
aataatgtggtggacggatctgttccacctgtgaaagaagaacctaatatatgggcatca
gttggggatgtctctaatgaacaagagaatgagaattccccattagaggagttttcaggg
agcaaatccgaaatgagtggggtaaacccctctacttcctcaatatcaccaattctgatt
agaagcgctgcagagtgcgaagaagaggaaaaatctgctgctttgagtcagaatcccaag
agtgccactagtaatgttggtgcttcaaaatcaaattgcaagtcgaaaaaatcgcctcct
gaggatcatgcaaatgagtcaccattttctaattctggtctttttccaactaagaatgtt
aagaagtcaaaacgtgtcttgcaaaaggaaggagagatagatttcaattctatcctcaaa
agtctagatgccgatgggaacaagcacaattcatcccacacacatactatgaatggctca
actgaccaggaggatgaagttgaggctcctataactgcaaaaaaactgaagattggaacg
aaagttactgccaaggtttatcaaattcgtgcacatgggttggtccttgatttgggtgga
ggacttcgtggcatgtatcggtttgagactgatggaaaggaggactttgaggtaggtgat
gagttaagagttgagtgttcaagcttttctagcaaggggattccagtagtatctttggtg
gatgatcaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system