KEGG   Rosa chinensis (China rose): 112198419
Entry
112198419         CDS       T06020                                 
Name
(RefSeq) ABC transporter B family member 21
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    112198419
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rcn02000]
    112198419
   04147 Exosome [BR:rcn04147]
    112198419
   04090 CD molecules [BR:rcn04090]
    112198419
Enzymes [BR:rcn01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     112198419
Transporters [BR:rcn02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    112198419
Exosome [BR:rcn04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112198419
CD molecules [BR:rcn04090]
 Proteins
  112198419
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_29 AAA_22 ABC_ATPase AAA_21 AAA_16 RsgA_GTPase Zeta_toxin AAA_30 AAA_15 ATP-synt_ab
Other DBs
NCBI-GeneID: 112198419
NCBI-ProteinID: XP_024195312
Position
4:52999464..53004826
AA seq 1214 aa
MDYLLMSVGTISAIGNGLCMPLMAIVFGDLLTSFLETGNNKRVADAVSKVALKYVYLALG
GAAAAFLQMSCWMVTGERQAARLRSLYLKTILRQDVSYFDQEINSGEIVGRMSGDTLLIK
EAMGEKVGTFIQVVATFTGSYIIAFFKGWLLTLVMISSIPPLVFSGAVMNHFIVKLASNG
QAAYSGGAIVVEETIGSIRTVASFTGEKQAISNYNNSLNKAYKSGVQEGWASGLGSGALR
LMVFCTYALAVWFGGIMILEKGYKGGDVMTVIFAVLMGSLSLGKAFPCISAFAPGQAAAY
KMFETINRKPEIDAYDTTGRVLQDIRGDIELRDVCFSYPTRLDEQIFNGFCLSIPSGATA
ALVGESGSGKSTVLSLIERFYDPQDGEVLIDCVNIKEFQLKWIRQNIGLVSQEPVLFTGS
IKDNIAFGKDGATTEEVATASELANAAKFIALLPQGIDTLVGEHGTQLSGGQKQRVAIAR
AILKNPRILLLDEATSALDTKSERIVQEALDRVMINRTTVIVAHRLSTVRNADTIAVIHQ
GIIAQKGPHSELIRNPDGAYSRLIRLQETSSLSEDSEHTNCLNSDKSSPRRSSSHHSLSI
SYGIPNASGILKTTAVEPDVPASVPTKGPPGVSLRRVAYLNKPEIPVLLLGTIVAAVNGV
IFPVYGSLLSSVIKTFFEPPHELRKHSKFLASIFVILGVVSFLAQSSRAHLFAVASCRLI
RRVRAMCFEKVVYMEVSWFDEAEHSSGAIGARLSIDAASLRGLVGDAFGLVVENTAAAIM
GVIIAFGANWQLSLVILVLLPLLGINGYLQDQYMKGFSADAKKLYEDASQVASDAVGSIR
IVASFCAEEKMIELYKKKCESPIKTGIRQGLVSGIGFGVSLFLLFSAFALIFYTGGLLVA
AGKTTASAVFRAVFALTIASFGLAQSSSLATDVSKGKSSAASIFEILDMKSKIDSSDNSG
MTIENVKGELEFHHVNFKYPSRPNVPIFNDLCLTISHGETIALVGESGSGKSTVISLIQR
FYDPDSGHITLDGIVIQKLELTWLRQQMGLVSQEPLLFNDTIRANIAYGKEGETTEAEII
AAAELANAHEFISSLQHGYDTIVGERGVQLSGGQKQRVAIARAIMKTPKILLLDEATSAL
DAESERVVQDALDRVIVDRTTVVVAHRLSTIKGADLIAVVKNGVVAEKGKHETLINIRNG
IYASLVALHASAST
NT seq 3645 nt   +upstreamnt  +downstreamnt
atggattacctgttaatgtctgttggtacaatcagcgctattggtaatggactctgtatg
cctctaatggccatagtctttggagatctacttacttcttttttagaaactgggaataac
aagagagtggctgatgcagtttccaaggtggctctaaagtatgtttacttggctcttggg
ggtgctgctgcagcatttctacagatgtcatgctggatggtcactggagagagacaggct
gcacgattacgaagtttatacttgaagaccatactgaggcaagatgtcagctattttgat
caagaaatcaactctggagaaattgttgggaggatgtcaggtgatactctgctcattaaa
gaggcgatgggtgagaaggtaggaacttttatccaagtagtcgcaacattcacaggcagc
tatattatagcattttttaagggatggcttctcacccttgtcatgatatcctctattccc
cctcttgtcttctcgggtgctgtcatgaaccatttcatagtgaaattggcatccaatgga
caagctgcatattcaggaggagcaattgtggtagaggagacaattggttctatcagaact
gttgcatcgttcacaggggagaagcaagctatatctaactacaataattccttgaataaa
gcttacaagtccggtgtgcaagagggttgggcatctggtttgggttctggtgcacttagg
cttatggtattctgtacatatgctttggctgtatggtttggtggaataatgatacttgaa
aaaggatacaagggaggagatgtcatgacagtaatttttgctgtgttgatgggctctctg
tctcttgggaaagcatttccttgcatcagtgcatttgctcctggacaagctgcagcttat
aagatgtttgagacaattaacagaaaacccgagatagatgcatatgatactactgggagg
gtattacaagatattcgtggagacatagaactgagggatgtttgttttagttatcccaca
agactggatgagcaaatattcaatggattttgtctctcaatacctagtggtgcaactgct
gctttggttggagaaagcggaagtggtaaatcaactgtactcagtttgattgagagattt
tatgaccctcaggatggtgaagttcttattgattgtgttaatatcaaagagttccaactg
aaatggatcagacagaacattggccttgtaagccaggaaccagttttgtttactggtagc
attaaagataatattgcgtttggaaaggatggtgctactactgaagaggtagcgactgct
tctgagcttgccaatgctgcaaaattcatagctttactgcctcagggaatagataccttg
gttggtgagcatggaactcagctttctggggggcaaaagcaaagagttgctatagccaga
gcaattctgaagaacccgagaattctacttttagatgaagcgacaagcgcacttgacaca
aaatcagaaagaattgtgcaggaggcgctggacagggtaatgattaaccggactactgtc
atagtagcccaccgcttgagcacagtaaggaatgctgacaccattgctgtaatacatcag
ggaataattgctcagaaaggaccacattctgagctaatcaggaatcccgatggagcatat
agcaggcttataaggttgcaagaaaccagttctctgtcagaagactcggaacatactaat
tgtctaaattctgataaatcatctccaagaagaagcagtagtcatcactcattatcaatc
tcatatggtattcctaatgcaagcggtatccttaaaacaacagctgtagaacctgacgtt
cctgcttctgtaccaacaaaagggcctccaggagtctctcttcgccgcgttgcttacctg
aacaagccagagataccagtgctacttctaggtactatagttgcagctgtcaatggggta
atcttccctgtctatggtagtttgttgtcaagtgtaatcaagaccttctttgagccaccc
catgaacttcgtaagcattcaaagtttttggcatcaatctttgttattcttggagtggta
tctttcttggcacaatcgtcaagagcacacctctttgccgtggcgagttgcaggttaata
agaagagtccgcgcaatgtgctttgagaaggtggtttacatggaagtaagttggtttgat
gaagctgagcactcaagtggtgccattggggcaaggctttctatagatgcagcctctttg
agagggcttgttggagatgcttttggtttggtggttgagaatacggcagcagcaattatg
ggggtgattattgcttttggtgcaaattggcaactttctcttgtaatccttgttctgtta
cctttattgggaataaacggatatcttcaagaccagtacatgaaaggattcagtgcagat
gcaaagaaattgtacgaggacgcaagccaagtagctagtgatgctgtggggagtattcgg
atagttgcttccttttgtgctgaagagaagatgattgagttgtacaagaaaaaatgtgaa
agccctattaagacagggataagacaaggtttagtttctgggataggttttggggtatca
ctctttttactgttttcagcgtttgccttaatattttacactggtggtctacttgttgca
gcgggcaagacaacagcctctgctgttttccgggctgtctttgctctcactattgcttct
tttggacttgctcagtcgagctccctagcaactgatgttagtaagggaaagagctctgct
gcttccatattcgaaattcttgacatgaaatcaaaaatagactctagtgataactcgggc
atgacaatagaaaatgtgaagggagaacttgaatttcaccacgtcaatttcaagtatcct
agtagacctaacgtgccaattttcaacgatctttgcttgaccattagtcatggcgagaca
attgctctggttggtgaaagtggaagtggaaaatcgacagtaatctctttgatccagaga
ttttacgatcctgattcaggtcacattacattggatggaatcgtaattcagaaactagag
ttgacgtggttgagacagcaaatggggctggtgagccaggagcctctgctgtttaatgac
acgatccgagctaacattgcatatggaaaggaaggagagacaaccgaggctgaaattata
gctgcagcagaactggcaaatgcacacgagttcattagtagtttacaacatggttatgat
acaatagtaggagagcgaggggtccaattgtccggtggacagaagcaaagagttgctatt
gcacgagctattatgaagacaccaaagatattactacttgatgaagccaccagtgctctt
gatgctgaatccgaacgagtggttcaagatgcactggaccgagttattgtggatcgaacc
acagtggttgttgcccatcggttatccacaataaaaggtgcagatttgattgctgtggta
aaaaatggagtcgttgcagagaaaggaaagcatgaaactttgatcaatatccgcaatggc
atttatgcatctttggtagcattgcatgcaagtgcctcaacttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (26)   

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