KEGG   Roseobacter denitrificans: RD1_2100
Entry
RD1_2100          CDS       T00376                                 
Name
(GenBank) conserved hypothetical protein
  KO
K04075  tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
Organism
rde  Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rde03016]
    RD1_2100
Enzymes [BR:rde01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.19  tRNAIle-lysidine synthase
     RD1_2100
Transfer RNA biogenesis [BR:rde03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    RD1_2100
SSDB
Motif
Pfam: ATP_bind_3 SepSecS
Other DBs
NCBI-ProteinID: ABG31700
RoseoBase: RD1_2100
UniProt: Q167Z3
Position
2003311..2004555
AA seq 414 aa
MCDLDAEIDAHFVNDIPKALGVAVSGGSDSMALLVLLCGFAERNGVALSCATVDHGLRPE
AADEARSVAGYCAAHDVPHVTLKWEGWDGTGNTQNAARVARYRLLADWARGQGIADIALG
HTQDDQAETVLMGLARASGVDGLSAMPARRDDRGLCWHRPLLATSRAGLRGFLSANGVAW
CEDPSNDDAQFERIKARRALTTLAELGVDRASLAQVAQNMAQARAALEQQTRRAIGDLVS
LLGGGAMMPWSGFQTLPSEIARRVLMAAIDWIAAPPHAPRQKALTAALSALRASGSATVA
GCRLILKDDRFWMFREFQAVAHARADASQLWDNRWKVTGGQGKQAREIRALGEIGLQQHP
EWRTMGLPRALLLATPAVYQGDVLIAAPVVQNTARWRADVIKRPGCLFDEVFGH
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtgcgatcttgacgctgagatcgacgcacattttgtgaatgacatcccgaaagcactt
ggtgttgccgtgtcgggcggcagtgattcaatggcgctgctggtcttgctgtgcggcttt
gcggaacgcaatggggtcgcgctgtcctgtgcgacggtggatcatgggctgaggcccgag
gcggctgacgaggcgcggagcgttgcaggatattgcgccgcgcatgatgtgccgcatgtc
acgctgaaatgggagggatgggacggcacgggcaatacgcaaaacgctgcccgcgtggcg
cggtatcggctgctggcggactgggcgcgggggcagggcattgcggatatcgcgctgggg
cacacgcaggatgatcaggccgaaaccgtgctgatggggctcgcgcgtgcgtccggtgtt
gatgggctcagcgcgatgccggcacggcgcgatgatcggggcctgtgctggcaccggccc
ctcctcgctacatcgcgggcagggttgcgcggtttcctgagcgcgaatggtgtggcgtgg
tgcgaggatcccagcaacgatgatgcgcaattcgaaaggataaaggcacgccgcgcgctc
acgacgttggcggaactgggggtggatcgcgcatccctcgcgcaggttgcacagaatatg
gcacaggcgcgggcagcactggagcagcagacgcggcgggcgattggtgatcttgtcagc
ctgcttggcggtggtgcgatgatgccatggtccggctttcagaccctgccgagcgagatt
gcgcgccgggtgctgatggccgccatcgactggatcgccgcgccgccccatgcgccgcga
caaaaagccctcaccgccgctctgtcggcgttaagggccagcggcagcgcaacagtggcg
ggctgtcgtttgatcctcaaggatgaccggttctggatgttcagggaatttcaggccgtg
gcgcatgcgcgtgcagatgcatcacagctgtgggataatcgctggaaagtcaccggtggt
cagggcaaacaggcaagagaaatcagggccttgggtgaaattggtctgcaacagcacccg
gagtggcgaaccatgggcctgccgcgtgcactcttgctcgccacgccggctgtttaccag
ggcgacgtcctgatcgcggcaccggtggtgcaaaacacggcacgatggcgcgcggacgtg
ataaaaaggccgggctgcctttttgatgaggtattcggccattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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