LOCUS NC_009449 1336 bp ss-DNA circular VRL 13-AUG-2018
DEFINITION Honeysuckle yellow vein beta-[Japan:Fukui:2001], complete genome.
ACCESSION NC_009449
VERSION NC_009449.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Honeysuckle yellow vein beta-[Japan:Fukui:2001]
ORGANISM Honeysuckle yellow vein beta-[Japan:Fukui:2001]
Viruses; Viruses incertae sedis; Tolecusatellitidae; Betasatellite;
Honeysuckle yellow vein beta.
REFERENCE 1
AUTHORS Ueda,S., Onuki,M., Hanada,K. and Takanami,Y.
TITLE Unique grouping of the Far East Asian begomovirus complex based on
sequence analyses of the DNA-A genome and associated DNAbeta
satellite molecules isolated from tomato, honeysuckle and
Eupatorium plants in Japan
JOURNAL Arch. Virol. 153 (3), 417-426 (2008)
PUBMED 18175045
REFERENCE 2 (bases 1 to 1336)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1336)
AUTHORS Ueda,S.
TITLE Direct Submission
JOURNAL Submitted (23-SEP-2005) Contact:Shigenori Ueda National
Agricultural Institute for Kyushu Okinawa Region; 1823 Mii, Kurume,
Fukuoka 839-8503, Japan
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to AB236322.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..1336
/organism="Honeysuckle yellow vein
beta-[Japan:Fukui:2001]"
/mol_type="genomic DNA"
/isolate="Fukui"
/isolation_source="tomato"
/db_xref="taxon:435486"
/geo_loc_name="Japan: Fukui"
/collection_date="2001"
/note="DNA beta, satellite molecule associated with
Tobacco leaf curl Japan virus;
originally submitted as 'Tobacco leaf curl Japan
virus-[Fukui]-associated DNA beta'"
gene complement(207..557)
/gene="betaC1"
/locus_tag="HYVBV2001_gp1"
/db_xref="GeneID:5129797"
CDS complement(207..557)
/gene="betaC1"
/locus_tag="HYVBV2001_gp1"
/codon_start=1
/product="C1 protein"
/protein_id="YP_003706632.1"
/db_xref="GeneID:5129797"
/translation="MTIIYNNGKGIKFIIDVRLQQFIRVQVQVYSTNQPVLTGIRCNI
PYTYVHMNPPFDFNGTEELVRDTLELMYDESDISNFKQEEMIDSIDIVMMHWLSDMGV
DTVDKYVVRNRYTV"
misc_feature complement(210..554)
/gene="betaC1"
/locus_tag="HYVBV2001_gp1"
/note="Beta-satellite pathogenicity beta C1 protein;
Region: Pathogen_betaC1; pfam09593"
/db_xref="CDD:401507"
ORIGIN
1 accggtggcg agttggggga ctcgggggaa aggtgggccc cacctttctg tataagtttt
61 ggtttattgc actctgagtc cctgtacttt gtcctattca tttttatacc ctaaaaatga
121 atttaatgaa gaataaaaat aaaattaatc attaatttta tttacacgga gatatgcaat
181 acattgctta tcgtagtaca tggtagttat acggtatatc tattccgtac aacatattta
241 tctactgtat ctacccccat atcacttaac cagtgcatca tcacgatatc aattgaatca
301 atcatctctt cttgtttgaa attggagatg tctgactcat cgtacatcaa ttccagtgta
361 tccctgacta gctcctctgt cccgttgaag tcgaaagggg gattcatatg gacgtatgtg
421 tatggtatgt tgcagcgtat acctgttagt accggttgat tcgttgagta tacctggacc
481 tgcactctga tgaactgttg gagccttacg tctatgatga acttgatgcc cttgccgttg
541 ttatatatta tcgtcatctc atcatgctgg atctatggtc atctatctat gtccttttat
601 agagtggtga tttgtgggtt gtgtgtctca atttggtcca tgtatttgtg cttatttgtt
661 cttggaagta ttgtttccta ttaattctgc tatccatcct ttatttctga aagaaaatag
721 aaagagaaaa agaaaaatgg aatcaaagag aaaagaaaat gaaaacaaaa aaagaaccca
781 acacaaaaat agacaaataa atatagaaaa gaacacctat tccggcataa agggagcgca
841 gctcaagtgt caaaaaaaaa atagaaaaga aatggagaaa aaaaaagaag aaaaaagaaa
901 tacttgaacg aagtgaaaat aaaattaaaa tagaaataag aaaataatta aatgaagccc
961 aaaaacaatt tatctcggaa aaagcccaaa taaatacccg gcccatgacc caatttgaat
1021 ttgactgttc accataatta caataatgcc atgcccccca gtgcccccca attgcccccc
1081 gattcaatcg ggggacactt atccgtacat tttaattgga caacaatacc cctgaaaagc
1141 agagataaca ggcgcgtggg agtgccctgt aaaagtgctt ttctctctcc tcaaaccccc
1201 cggagacgat gatcggaggc cttccggtca tcattttccg acacgcgcgg cagtgcgaac
1261 acggatgtgg gcaaaccact acgctacgca gcagccttag ctacgccgga gcctagctcg
1321 ccaccgttat aatatt
//