KEGG   Rhodococcus fascians D188: A3L23_04459
Entry
A3L23_04459       CDS       T04328                                 
Symbol
sigK
Name
(GenBank) ECF RNA polymerase sigma factor SigK
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
rfa  Rhodococcus fascians D188
Brite
KEGG Orthology (KO) [BR:rfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rfa03021]
    A3L23_04459 (sigK)
Transcription machinery [BR:rfa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A3L23_04459 (sigK)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_28 HTH_10 HTH_24 HTH_17 HTH_AsnC-type HTH_23 Rv2175c_wHTH GerE HTH_3 Terminase_5 HTH_38 HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: AMY55762
UniProt: A0A165MZW5
Position
complement(4717536..4718291)
AA seq 251 aa
MTTSVMIDELDHEPVCWDDSPMSVPFSDASGSAGTGRDRTPPESEDSTSVEDAVCAVPSP
QLKNLRAEETDRLRRLMAAVAQGDRSAFAELYDATSSRVYGMVVRVLRDPGYSEETAQEV
FLQIWRAAPNYDPSQGSPLAWIMTLAHRRAVDRVRSEQSGTDREAAYGAVSHTPEHDEVL
ETVTQRLESEAVVACLDTLTDTQSESVRMAYYSGYTYREVAERLGVAVPTIKSRIRDGLI
KLKTCLGVIPQ
NT seq 756 nt   +upstreamnt  +downstreamnt
atgaccactagtgtcatgatcgatgaactcgatcatgaacccgtctgctgggacgacagt
ccgatgagcgtgccgttctccgacgcttccggatctgcgggcaccggccgtgaccgaacg
ccgcccgagtccgaggacagcacctcggtcgaggatgcggtgtgcgcagtaccgagcccg
cagctgaagaatctgcgtgccgaggagacggaccgtctccgtcgcctgatggccgccgtt
gcccagggcgaccggtcggccttcgccgaactgtacgacgccacgtcctcccgtgtgtac
gggatggtggtgcgcgtgcttcgcgatccggggtacagcgaggagaccgcgcaggaggtg
ttcctccagatctggcgtgcggcaccgaattacgatccgagccaggggagtccgctggcg
tggatcatgacgctggcacatcgccgggcggtcgatcgggtacgtagcgaacagtcgggt
accgaccgcgaggcggcgtacggtgccgtgagtcacacacccgagcacgacgaggtactc
gagacggtgacccagcggctcgaatcggaggcggtcgtggcctgtctcgacactctgacc
gatacgcagagcgagtcggtacgaatggcttattacagcgggtacacctatcgcgaggtt
gccgaacggctcggggtggccgtgccgacgatcaaatcgcgcatacgagatggattgatc
aagttgaagacatgcctgggggtgatcccgcaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (23)   

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