KEGG   Rubrivivax gelatinosus: RGE_13830
Entry
RGE_13830         CDS       T01803                                 
Symbol
msbA
Name
(GenBank) lipid A ABC transporter permease/ATP-binding protein MsbA
  KO
K11085  ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
Organism
rge  Rubrivivax gelatinosus
Pathway
rge02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rge00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    RGE_13830 (msbA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rge02000]
    RGE_13830 (msbA)
Enzymes [BR:rge01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.6  ABC-type lipid A-core oligosaccharide transporter
     RGE_13830 (msbA)
Transporters [BR:rge02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    RGE_13830 (msbA)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_16 ABC_ATPase AAA_29 AAA_22 AAA_21 DUF87 DUF815 DUF3584 RsgA_GTPase DUF4199 nSTAND1 FtsK_SpoIIIE AAA_25 AAA_15
Other DBs
NCBI-ProteinID: BAL94724
UniProt: I0HNY7
Position
complement(1416453..1418222)
AA seq 589 aa
MARNDSLALYRRLLGYVRPYTQVFVFGVLAMIVNAAAEASVPALLRQLIDGSFVEKDPEF
AHLMPLALIGLFVVRGLSDYVHSVTLASVATHVVLDLRNAMFQRILSLPLAYFDRQPTAT
LMSRLTYNAQQISPIITTSLITIVKDSLTVIGLLGYMLWLNWKLSLLFFTVLPVIAWVIR
SVSRRMRQFSRAQQNSMGSMTHVAHEVLGAPREIRIFGGAAYEAKRFDEVAAAVRRYMMK
TTRTSSANGPIVQFIAVLALAAIIYYATLATRSDQLTVGGFVSFFGAMALLLAPLKRLSN
VNEALQRGLAAAASVFEVIDAEPERDTGTRELPRSSGHLRFENVGFRYAGADGDALDGVT
LDIRPGESVALVGASGSGKSTLMSLIPRFYSPDRGRILLDEIDTHELRLADLRANIALVT
QHVVLFNDTVAANIAYGAPGEVSREDIERAAETAHAMEFIRELPQGLDTPIGENGTRLSG
GQRQRLSIARALLKDAPILLLDEATSALDTESERIVQQAIDNLKRGRTTVTIAHRLSTIA
NADRVVVMDQGRVAEVGTHDELLARGGLYHKLHQLQFRDGSAPGAALAP
NT seq 1770 nt   +upstreamnt  +downstreamnt
atggcccgcaacgactccctcgcgctgtaccggcgactgctcggctacgtgcgcccgtac
acccaggtcttcgtcttcggcgtgctggcgatgatcgtcaacgctgccgccgaggcctcg
gtgccggcgctgctgcgccagctgatcgacggcagcttcgtcgagaaggatcccgagttc
gcgcacctgatgccgctggcgctgatcgggctgttcgtcgtgcgcggcctctccgactac
gtgcactcggtgacgctggccagcgtcgccacgcacgtcgtgctcgacctgcgcaacgcg
atgttccagcgcatcctgtcgctgccgctggcctacttcgaccgccagccgacggcgacg
ctgatgtcgcgcctgacctacaacgcgcagcagatcagcccgatcatcaccacctcgctg
atcacgatcgtcaaggactcgctgaccgtcatcggcctgctcggctacatgctgtggctg
aactggaagctgtcgctgctgttcttcaccgtgctgccggtcatcgcctgggtcatccgc
tcggtcagccggcgcatgcgccagttcagccgcgcgcagcagaactcgatgggctcgatg
acgcacgtcgcgcacgaggtgctgggcgcgccgcgcgagatccgcatcttcggcggcgcc
gcctacgaggccaagcgcttcgacgaggtcgcggccgcggtgcgccgctacatgatgaag
acgacgcgcacctcgtcggccaacggcccgatcgtgcagttcatcgccgtgctggcgctg
gccgcgatcatctactacgcgacgctggccacgcgctccgaccagctcaccgtcggcggc
ttcgtctcgttcttcggcgcgatggcgctgctgctggcgccgctcaagcgcctgtccaac
gtcaacgaagcgctgcagcgcggcctggccgcggcagcctcggtgttcgaggtcatcgac
gccgagcccgagcgcgacaccggcacgcgcgagctgccgcgttccagcggccatctgcgc
ttcgagaacgtcggcttccgctacgccggcgccgacggcgacgcgctggacggcgtgacg
ctggacatccgccccggcgagtcggtcgcgctggtcggcgcctcgggcagcggcaagtcg
acgctgatgtcgctgatcccgcgcttctattcacccgaccgcggccgcatcctgctcgac
gagatcgacacccacgagctgcgcctggccgacctgcgcgccaacatcgcgctggtcacc
cagcacgtcgtgctgttcaacgacaccgtcgccgccaacatcgcctacggcgcgccgggc
gaggtcagccgcgaggacatcgaacgcgcggccgagaccgcgcacgcgatggagttcatc
cgcgagctgccgcagggcctggacacgccgatcggcgagaacggcacgcgcctgtccggc
ggccagcgccagcgcctgtcgatcgcgcgcgcgctgctgaaggacgcgccgatcctgctg
ctcgacgaggccacctcggcgctggacaccgagagcgagcgcatcgtccagcaggcgatc
gacaacctgaagcgcggccgcaccacggtgacgatcgcccaccggctgtcgacgatcgcc
aacgccgaccgcgtcgtcgtgatggaccagggccgcgtggccgaggtcggcacccacgac
gaactgctggcgcgcggcggcctgtaccacaagctgcaccagctccagttccgcgacggc
agcgcgccgggcgcggccctcgcaccgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (40)   

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