KEGG   Rubrivivax gelatinosus: RGE_25170
Entry
RGE_25170         CDS       T01803                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
rge  Rubrivivax gelatinosus
Pathway
rge02020  Two-component system
rge02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:rge00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RGE_25170 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    RGE_25170 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rge03021]
    RGE_25170 (rpoN)
Transcription machinery [BR:rge03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RGE_25170 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR LacI HTH_23 HTH_3 COQ7
Other DBs
NCBI-ProteinID: BAL95858
UniProt: I0HS71
Position
2644384..2645814
AA seq 476 aa
MASMDLRAEHRQTQTLSPRLQHAVRLLQMSSLDFAAMVRDKMGQNPFLEPEEGEDGEPSA
APESETAGEDASPPVGEADSLSMEQGDDRDMWHADGPGSTRRAEDGEISAMEMMAVETTL
NMHLHEQLNVLPLEPRDRALAQAIVESLDDDGYLRTPLEEVAQVLQLDPPPTPTELNIAL
KRVQSLDPAGIGARSVAECLQLQLSKIDCEATRLLAERIVSRHLQTLAAKDVNGLAHQLG
ETPARVEAVCDRIRRLDPRPGWRFGSSHIAYVVPDVLVKRVRGQWTVQLNPAIVPRVRFN
HVYAELFQRHRSAQNTEMAGHLQDARWTLRNVEQRFSTILDVAQAIVRRQRHFLEYGPMA
MKPLVLREIADEVGIHESTVSRVTNNKYMATPIGVFELKYFFSRAMISANGSACSATAIR
GLIKDIIEAERPDRPMSDAEITRQLAQQGLVVARRTVTKYRQMLRIESVERRRRHS
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggcatcgatggacctgagagcggaacaccgacagacgcagacgctttcgccgcgcctg
cagcacgccgtgcgcctgctgcagatgtcttcgctggactttgccgcgatggtgcgcgac
aagatgggccagaaccccttcctcgaacccgaggaaggcgaggacggcgaaccgtcggcg
gcgcccgaaagcgagaccgcgggcgaggacgcgtcgccccccgtgggcgaggccgacagc
ctgtcgatggagcagggcgacgaccgcgacatgtggcacgccgacggcccgggctcgacc
cgccgcgccgaggacggcgagatctcggcgatggagatgatggccgtcgagacgacgctc
aacatgcatctgcacgagcagctcaacgtgctgccgctggagccacgcgaccgggcgctg
gcgcaggccatcgtcgagtcgctggacgacgacggctacctgcgcacgccgctggaggag
gtggcccaggtgctgcagctggacccgccgccgacgccgaccgaactgaacatcgccttg
aagcgtgtgcagtcgctggacccggccggcatcggcgcgcgcagcgtcgccgagtgcctg
cagctgcagctgtcgaagatcgattgcgaagcgacgcggctgctggccgagcgcatcgtc
tcgcgccacctgcagacgctggcggccaaggacgtcaacggcctggcccaccagctcggc
gagacgccggcgcgcgtcgaggcggtctgcgaccgcatccgccggctcgacccgcgcccg
ggctggcgcttcgggtcctcgcacatcgcctacgtcgtgcccgacgtgctggtcaagcgc
gtgcgcgggcagtggacggtgcagttgaacccggcgatcgtgccgcgcgtgcgcttcaac
cacgtctacgccgagctgttccagcgccaccgcagcgcccagaacaccgagatggccggc
catctgcaggacgcgcgctggacgctgcgcaacgtcgagcagcgcttctcgaccatcctc
gacgtcgcccaggcgatcgtgcgccgccagcgccacttcctcgagtacggcccgatggcg
atgaagccgctggtgctgcgcgagatcgccgacgaggtcggcatccacgagtccaccgtg
tcgcgggtgacgaacaacaagtacatggccacgccgatcggcgtcttcgagctgaagtac
ttcttctcgcgggcgatgatcagcgccaacggcagcgcctgctcggcgaccgcgatccgc
ggcctgatcaaggacatcatcgaggccgaacgcccggatcgtccgatgtcggatgcggag
atcacgcgccagctcgcgcagcagggcctggtcgtcgcccggcgcacggtgaccaagtac
cggcagatgctgcgcatcgagtcggtggagcggcggcggcggcattcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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