KEGG T03046: LPU83

Rhizobium favelukesii: LPU83_0137

Entry

LPU83_0137        CDS       T03046

Symbol

truB

Name

(GenBank) tRNA pseudouridine synthase B

K03177

tRNA pseudouridine55 synthase [EC:5.4.99.25]

Organism

rhl Rhizobium favelukesii

Brite

KEGG Orthology (KO) [BR:rhl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rhl03016]
    LPU83_0137 (truB)
Enzymes [BR:rhl01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LPU83_0137 (truB)
Transfer RNA biogenesis [BR:rhl03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LPU83_0137 (truB)
Prokaryotic type
    LPU83_0137 (truB)

SSDB

Motif

Pfam:

TruB_N TruB_C_2 TruB-C_2 TruB_C

Other DBs

NCBI-ProteinID:

CDM55823

UniProt:

W6RAT2

Position

138815..139747

AA seq 310 aa
MSKPRKPKGRPISGWLILDKPVDFGSTEAVSKIKWLFKAQKCGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVTWGEERATDDLEGDVTQSSDARPSEQQIRDLLPKYTGVI
SQVPPQFSAIKIAGERAYDLARDGEAVDIPSREVEIFRLTLLACPDANTAHFEVECGKGT
YVRALARDFGRELRSYGHISGLRRSFVAPFAEETMVPLADLVALEAIEDADERLAALDAL
LIDTSEALSSLPHLVVNDDQAHRLKMGNPILVRGRDAPVAESEAYATARGKLIAIGEIGQ
GEFRPKRVFG

NT seq 933 nt +upstreamnt +downstreamnt
atgtccaaaccacgtaaaccgaagggccgcccgatctccggttggctgatccttgataag
ccggtcgatttcggctccaccgaagccgtttccaagatcaagtggctgttcaaggcgcag
aagtgcggtcacgccggcacgcttgacccgctggcttcgggcatgctgccgattgcgctc
ggtgatgcgacgaagaccgttccctacgtgatggacggccgcaagatctacgaattcaca
gtgacctggggcgaggaacgcgcaaccgacgatctcgagggcgatgtgacccagagctcc
gatgcgcgcccgagcgagcaacagatccgcgatctcctgccgaagtataccggcgttatc
agtcaggttccgccgcagttctccgcgatcaagattgccggcgagcgcgcctatgatctg
gcccgtgacggcgaggccgtcgacatcccctcccgtgaggttgaaatcttccgtctcacg
ctgcttgcctgcccggatgccaatacagcgcatttcgaagtcgaatgcggcaagggcacc
tatgtccgggcgctggctcgcgactttggccgcgaactccgcagctatggccacatctcc
ggcctgcgccgcagttttgttgcgccctttgccgaagaaacaatggtgccgctcgccgat
ctcgtcgcgctcgaggcaatcgaggacgcggacgagcgacttgctgcactggacgccctt
ctgatcgacacgagcgaagcgctttcttcgctgccgcatctcgtcgtcaacgacgaccag
gcacaccggctgaagatgggcaatccgatcctcgtgcgtggccgggatgcgccggttgcc
gaaagcgaagcctacgccacagcccgtggcaagctgatcgcaatcggcgagattggccag
ggcgagttccgtccgaagcgcgtcttcggctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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