KEGG   Rhizobium favelukesii: LPU83_1115
Entry
LPU83_1115        CDS       T03046                                 
Symbol
betA
Name
(GenBank) choline dehydrogenase
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
rhl  Rhizobium favelukesii
Pathway
rhl00260  Glycine, serine and threonine metabolism
rhl01100  Metabolic pathways
Module
rhl_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:rhl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LPU83_1115 (betA)
Enzymes [BR:rhl01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     LPU83_1115 (betA)
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C FAD_binding_2 DAO NAD_binding_8 Pyr_redox_2 F420_oxidored TrkA_N Lycopene_cycl Thi4 ApbA Pyr_redox_3 FAD_binding_3
Other DBs
NCBI-ProteinID: CDM56789
UniProt: W6R779
Position
complement(1099644..1101296)
AA seq 550 aa
MQQADFVIIGSGSAGSALAYRLSEDGKNTVIVIEAGGSDFGPFIQMPAALAWPMSMKRYN
WGYLSEPEPALNNRRITAPRGKVIGGSSSINGMVYVRGHAEDYNRWEELGAQGWAYADVL
PYFKRMEHSHGGEEGWRGTDGPLHVQRGVFRNPLFHAFIEAGKQAGFEATEDYNGSKQEG
FGLMEQTIFGGRRWSAANAYLKPALKRPNVEVVYGHAHKVVVENGRATGVEIERGGRVEV
VKANREVIVSASSFNSPKLLMLSGIGPGAHLQDMGIEVKANRAGVGANLQDHMEFYFQQV
STKPVSLYSWLPWFWQGVAGAQWMFTRSGLGTSNQFEACAFLRSAPGVKQPDLQYHFLPV
AISYDGKAAAKSHGFQVHVGYNLSKSRGNVTLQSSDPKADPVIRFNYMSHPEDWEKFRHC
VRLTREIFGQKAFDQYRGPEIQPGETVQTDEQIDAFLRKHLESAYHPCGTCKMGAKSDPM
AVVDPETRVIGVDGLRVADSSIFPHVTYGNLNGPSIMTGEKAADHILGKQALPRSNQEPW
ISPRWAVSDR
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgcagcaggcagatttcgtcattattggctccggctcggcgggctccgccctcgcctat
cggctttcggaagacggcaagaacaccgtgatcgtcatcgaggcgggcggctccgatttc
gggccgttcatccagatgccggcagcccttgcctggccgatgagcatgaagcgctacaac
tggggctatctctccgagcccgagcctgctctcaacaaccggcgcatcaccgcgccgcgc
ggcaaagtgatcggtggctcctcctcgatcaacggcatggtctatgtgcgcggccacgcc
gaggactataatcgctgggaagagctcggggcccagggatgggcctatgcggacgtcttg
ccctacttcaagcggatggagcacagccacggcggcgaggaaggctggcgcggcactgac
ggaccgttgcatgtccagcgcggcgtctttcgcaacccactgttccacgccttcatcgag
gctggcaagcaggcgggcttcgaggcgacggaggattacaacggctcgaagcaggaaggc
ttcgggctgatggagcaaaccatcttcggcggccgccgttggtcggcggccaacgcctat
ctgaaaccggcgctgaagcggccgaacgtggaggtcgtctatggccacgcccacaaggtg
gtggtcgagaacggccgggcgaccggcgtcgagatcgagcgcggcggcagggtcgaggtg
gtgaaggcgaaccgggaggtcatcgtttcggcctcctccttcaactcgccgaagctcttg
atgctctcgggcatcggccccggcgcccatctgcaggacatgggcatcgaggtgaaggcg
aaccgggcgggcgtcggcgccaatctgcaggatcacatggaattctacttccagcaggtc
agcaccaaaccggtctcgctctattcgtggcttccctggttctggcagggcgtcgccggc
gcgcagtggatgttcaccagatccgggctcggcacctcgaaccagttcgaggcctgcgcc
ttcctgcgctcggcgcctggtgtcaagcagcctgacctccagtatcacttcctgccggtg
gcgatcagctatgacggcaaggcggcggccaagagccatggcttccaggtgcatgtcggc
tacaatctgtcgaagtcgcgcggcaacgtcacgctgcagtcctcggacccgaaggccgac
cccgtcattcgcttcaactatatgagccatccagaggactgggagaaattccgtcattgt
gtgcggctcacgcgcgagatcttcggacaaaaggccttcgaccagtatcgcggaccggag
atccagccgggcgagactgtgcagaccgacgagcagatcgacgccttcctgcgcaagcat
ctggaaagcgcctaccacccctgcggcacctgcaagatgggcgcgaagagcgacccgatg
gcggtcgtcgatcccgagacccgtgtcatcggcgtagacgggctgcgcgtagcagattcg
tcgatctttccgcacgtcacctacggaaacctcaacggtccctcgatcatgaccggtgag
aaggcggccgaccatatcctcggcaagcaggcgctgccgcgctccaaccaggagccatgg
atcagcccgcgctgggcggtgagtgatcggtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (29)   

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