KEGG   Rhopalosiphum maidis (corn leaf aphid): 113548114
Entry
113548114         CDS       T06065                                 
Name
(RefSeq) nuclear pore complex protein Nup88
  KO
K14318  nuclear pore complex protein Nup88
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113548114
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rmd03019]
    113548114
Messenger RNA biogenesis [BR:rmd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113548114
SSDB
Motif
Pfam: Nup88 HetR_C APG6_N
Other DBs
NCBI-GeneID: 113548114
NCBI-ProteinID: XP_026804601
Position
1:complement(62607695..62644794)
AA seq 698 aa
MPSITDMLNLNKLDMFQTMRKVLETDGANIVRNLIAYKDQILYIWNPDECCLYSLLLNTV
HEEIPLYQKLFPVSPPIFDVDEILINEPGTLCALVGSKGVSVMRFPKRMGSKSLYDTGGS
QGEGVTCSTAILQDKFFINKHLTDVKRVRWYPGSPEDNHLVVLTNNKNCLRLFKVDKGTG
KLVSIWRLGPQTSRILASLGDTAVDFDFAPPVLLGDRIQSEPSIMWPILVLQGNGEVLCL
NTTVDDSMNIKSAKITGPLTMYPPADDNYSEDACSILVMDTVPPSVVIASNFGELYNCLL
LPDTQTKNNDEYEPSEYQHEYSLHIIETIELELGLNIEDNGEYDSFNTIHLKRDAAVTSR
YWCLHNTGVHSVTVPLTELLDEFSKTTTTDDFRGSPDIQGQSFVEYYICTGLMNGETKPI
KGFAVLSFPTDLLVTLLSNGEVVTQAVPDFHYNKLSIANTYMNEDNANSEDQVDNSENVD
KDDFSSFIAALLQKENGTKNTILKLGPDVPNEIVIQMVLQTMNMRRVTLNNHKIVSEEIE
RRVRMLAKAKERQLQEMQRLEEARQKLQDDVENKAEKLDEINNKQEELTQRASSILLKLV
SASPDSISIKKKRELLESYKTKMELMNKRIEEAREKWNIVQTESTASVYKQLYGTRSLKL
TLEQELVIKGNLSEMGSTILDLEKKVRDLRTVINTIAS
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgccttccattacagatatgctaaacttaaacaaactggacatgttccagaccatgaga
aaggtattagaaaccgatggcgcgaacatcgttcgaaatctaatagcatacaaagaccaa
atattgtatatttggaatcccgatgaatgctgtttgtactcgctactattgaatacagtt
catgaggaaattcctttatatcaaaaactctttcctgtatctccacccatattcgacgtt
gatgaaatattgatcaatgaaccaggcacgttgtgtgcacttgtgggctccaaaggtgta
tcggtgatgaggtttccgaaacgaatggggtccaaatctctatacgacactggtggaagt
caaggagaaggcgtaacatgcagcacggcaattttacaagataaattcttcataaacaaa
cacttgacggatgtgaaacgagtccgttggtatccaggcagccccgaggacaaccacctc
gtggtactcaccaataacaagaactgtttgcgactattcaaggtagacaaaggtaccggt
aagctcgtgtccatttggcgactgggcccacagacttctcggatattggcttcgctgggt
gacactgctgtagactttgatttcgcgccacctgtactcctcggcgaccgaatccaatcg
gaaccgtctatcatgtggcctatacttgtgttacaaggaaacggggaagtgttgtgtctg
aacacgaccgtcgatgactcgatgaacataaagtcagcaaaaataaccggtccattgacc
atgtacccaccagccgacgacaactatagcgaggacgcctgttccattcttgtcatggac
actgtaccaccatcggtcgtcatagcatccaacttcggtgaactgtacaattgcctcctg
ttgccagacacccaaaccaaaaacaatgatgaatatgagcctagtgaataccaacacgaa
tacagtttacacataatcgaaaccatcgaattagagttgggcttgaacattgaggacaat
ggtgagtacgacagcttcaacacaatacatttgaaaagagatgcggccgtcacgtccaga
tattggtgtttacacaacactggtgtacactcagtcacagtaccgcttacggaattgttg
gacgagttttctaaaaccaccactacagacgacttccgtggatcacctgacatacaagga
caaagttttgtagaatattacatttgcacgggtcttatgaacggcgaaacgaaacctatc
aaagggtttgccgtcctaagctttcctacagacttactagtcactttattaagcaatggt
gaagtcgttactcaagctgtcccagatttccattacaataaactgtctattgctaatacc
tatatgaacgaagataacgccaattctgaagatcaagtcgataattctgaaaacgttgac
aaagatgactttagttcatttatcgctgcattactacaaaaagaaaatggtacaaaaaat
acaattctaaaattaggaccagatgttcccaacgagattgtaatacagatggtcttacaa
actatgaacatgcgaagagtcacattaaataatcacaaaatagtttctgaagaaattgaa
agaagagtgcgcatgctagctaaagcaaaggaaaggcaattacaagagatgcaacgattg
gaagaagctcgacaaaaattacaagatgatgtagaaaataaagctgaaaaattagatgaa
attaataacaaacaagaagaattgacccaaagagcttcttcaatccttttgaaactcgtc
tcagcatcgcctgatagtatatcaataaaaaagaagagagaactgttggaatcatataaa
actaagatggaattgatgaataaacgcatcgaagaagctagagaaaaatggaacattgtg
caaaccgagtcaacagcatctgtatataaacaattatatggaacccgttcattaaaatta
actcttgaacaagaactagttattaaaggaaatttatccgaaatgggatctacaattttg
gatttagaaaaaaaagtgagagacttaagaactgtaattaatactattgccagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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