KEGG   Roseovarius mucosus: ROSMUCSMR3_03927
Entry
ROSMUCSMR3_03927  CDS       T04779                                 
Symbol
radD
Name
(GenBank) putative DNA repair helicase RadD
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rmm  Roseovarius mucosus
Brite
KEGG Orthology (KO) [BR:rmm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rmm02048]
    ROSMUCSMR3_03927 (radD)
Enzymes [BR:rmm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     ROSMUCSMR3_03927 (radD)
Prokaryotic defense system [BR:rmm02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   ROSMUCSMR3_03927 (radD)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N HSDR_N_2 SNF2-rel_dom Helicase_C AAA_34 AAA_11 PhoH nSTAND3 GBR2_CC
Other DBs
NCBI-ProteinID: ARE85373
UniProt: A0A1V0RUC5
Position
4049792..4052275
AA seq 827 aa
MHQGCGGLDKRFLSERDICTKFITPALRAAGWDEMTQIREEVSFTKGRIIVRGRLVSRGK
GKRADYILSVKPNIPLAIIEAKENTQAVGAGLQQALDYAETLDIPFVFSSNGDGFVFHDR
TGASPTPEVTLTLDEFPSPAELWARYQTAKGLSDEAAAVALQDYFDDGSGKTPRYYQVNA
VNTAIEAIAKGQDRVLLVMATGTGKTYTAFQIIWRLWKAGQKKRILFLADRNVLIDQTMV
NDFRPFAGNMAKLSTQSKTIERADGTSNDLTIALDKKRRIDTSYEIYLGLYQAITGPDES
QKLYREFSPDFFDLIVIDECHRGSAADDSAWREILAHFSTATQIGLTATPKETEYASNID
YFGKPVYSYSLKQGIRDGFLAPYKVIKVHIDRDVQGYRPVQGQLDRDGEEVEDRIYNTKD
FDRTLVLEDRTKLVAQKITEFLKQSGDRMAKTIVFCVDQEHAARMRQALINENADLVAQN
HRYVMRITGNDKEGLDQLGNFIDPEAPHPVIVTTSRLLSTGVDAQTCRLIVLDREVGSMT
EFKQIVGRGSRVHEDTQKLFFTVMDFRGSTSHFADPEFDGEPVQIYQPGPDDPITPPDDA
PQTDNEGAPLSPEPDDDETVLIDPIDPLDPLGGNTGGGPIRKVYVDGVGAVIVAERVEYL
DENGKLVTESLRDYTRKALKRQFASLDDFLKRWNSEGRKQAVFEELAAEGLPLDVIAAEL
GKDLDPFDLICHIAFDAKPLTRRERAESVKKRDVFTKYGPQAKAVLEALLEKYADEGVMN
LDDLGVLKIAPFSGMGSVVELVRAFGGKPGFEQAVHDLQSAIYEESA
NT seq 2484 nt   +upstreamnt  +downstreamnt
atgcaccaaggttgtggcggtttggataaacgattcctgagtgagcgtgacatttgcacg
aagttcatcacgccagccctgcgtgccgctgggtgggacgagatgactcagatccgcgaa
gaggtcagctttaccaagggacggatcatcgtgcgcggcaggctggtgagccggggtaag
ggcaagcgggctgattacatcctgtcggtaaaaccgaatatcccgctggcgattatagag
gccaaggagaacacacaggcggttggcgccgggctgcagcaggcactggactacgcggaa
acgctggacatcccgttcgtgttttcgtcgaacggcgatgggtttgtttttcatgatcga
actggtgctagcccgacacccgaggtcacactaaccttggatgagtttccgtcacctgcc
gagttgtgggcgcggtatcagacggctaaggggctatcggatgaagctgcggcggtggcg
ttgcaggattatttcgacgatggcagcggcaagaccccgcgctactatcaggttaacgct
gtcaacactgcgattgaagccatcgccaagggccaggaccgtgtgttgctggtgatggca
accggcaccggcaagacctacacggcgtttcagattatctggcggctttggaaggcggga
cagaaaaagcgcatcctgtttctggcggatcgcaacgtgctgatcgaccagaccatggtg
aatgatttccggcccttcgcgggcaatatggcaaaactgtcgacccagtccaaaaccatt
gagcgcgccgatggcacatcaaacgatctgacgattgccttggataaaaagaggcggatc
gacacatcctatgagatttatcttggcctctatcaggccatcaccggccccgatgaaagt
cagaagctctaccgcgagttttcaccagactttttcgatctgattgtgattgacgagtgc
caccggggaagcgctgcagacgattccgcctggcgcgaaattctcgcgcatttctcaacg
gcgacccagatcggcctgaccgcaacgccgaaggaaaccgaatacgcctcgaacatcgat
tactttggcaagccggtttacagctattcgctcaagcagggcatccgcgacggcttcctt
gcaccctacaaggtgatcaaggttcacatcgaccgggatgtgcagggctatcggcctgtt
caaggtcagctggatcgcgacggtgaagaagtcgaagatcgcatctacaacactaaggat
ttcgaccggacattggtgctggaggatcgtaccaaactggtcgcccagaagatcacggag
tttctgaaacaaagcggcgaccggatggccaaaaccatcgtcttttgtgtcgatcaggaa
cacgccgcccggatgcggcaggcgctcatcaatgaaaacgccgatctggtggcgcaaaac
catcgctacgtcatgcgtatcaccggcaatgacaaagaaggcctcgaccaacttggtaac
tttatcgacccggaagcgccccatccggtgatcgtgacaacttcacggcttctctcgacc
ggtgtcgatgcgcaaacctgtcgtctgatcgtcctcgatcgtgaagttgggtcaatgacc
gagttcaagcagatcgttggtcgcggcagccgtgtacatgaggatacccaaaagctgttc
ttcacagtcatggatttccgaggctcaacgagccatttcgctgacccggaattcgatggg
gagccggttcaaatttaccaacccggccctgatgacccgataacaccaccagatgatgcc
ccgcagacggacaatgaaggcgctcccttgtcaccggaaccggatgatgatgaaactgtg
ctgattgacccaatcgatccactcgacccacttggtggcaacacaggcggcggcccgatc
cgcaaggtctacgttgatggggtaggcgcggtcatcgtggctgaacgcgttgaatacctc
gacgagaacggcaagctggtcacagagtctttgcgcgactacacccgcaaggccctgaaa
cggcaatttgccagccttgatgatttcctcaagcgctggaacagcgagggccgcaaacag
gcggtgttcgaggaattggcagccgaaggcctgccgctcgatgtcatcgctgcggaactt
ggcaaggatctcgacccattcgacctgatctgccacatcgcttttgatgccaaacctctc
acccggcgtgagcgggctgaaagcgtgaaaaaacgcgatgtatttactaaatacggcccc
caggcaaaggccgttctcgaagccctgctggaaaaatatgccgatgagggcgtcatgaac
ctcgacgatcttggcgtcctgaagattgcgccattcagtggcatgggaagtgtggttgaa
ctcgttcgcgctttcggtggaaaacccgggttcgaacaggccgtccacgacctgcaatct
gctatttacgaagaaagcgcataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (35)   

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