KEGG   Rattus norvegicus (rat): 24390
Entry
24390             CDS       T01003                                 

Gene name
B4galt1
Definition
(RefSeq) beta-1,4-galactosyltransferase 1
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00052  Galactose metabolism
rno00510  N-Glycan biosynthesis
rno00513  Various types of N-glycan biosynthesis
rno00514  Other types of O-glycan biosynthesis
rno00515  Mannose type O-glycan biosynthesis
rno00533  Glycosaminoglycan biosynthesis - keratan sulfate
rno00601  Glycosphingolipid biosynthesis - lacto and neolacto series
rno01100  Metabolic pathways
Module
rno_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
rno_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    24390 (B4galt1)
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    24390 (B4galt1)
   00513 Various types of N-glycan biosynthesis
    24390 (B4galt1)
   00515 Mannose type O-glycan biosynthesis
    24390 (B4galt1)
   00514 Other types of O-glycan biosynthesis
    24390 (B4galt1)
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    24390 (B4galt1)
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    24390 (B4galt1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:rno01003]
    24390 (B4galt1)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    24390 (B4galt1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    24390 (B4galt1)
Enzymes [BR:rno01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     24390 (B4galt1)
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     24390 (B4galt1)
    2.4.1.90  N-acetyllactosamine synthase
     24390 (B4galt1)
    2.4.1.-  
     24390 (B4galt1)
Glycosyltransferases [BR:rno01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   24390 (B4galt1)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    24390 (B4galt1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   24390 (B4galt1)
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 24390
NCBI-ProteinID: NP_445739
RGD: 620900
Ensembl: ENSRNOG00000059461
UniProt: G3V722
Position
5
AA seq 399 aa
MRFREPFLGGSAAMPGATLQRACRLLVAVCALHLGVTLVYYLSGRDLSRLPQLVGVSSSL
QGGTNGAAASKQPSGELRPRGARPPPPLGVSPKPRPGSDSSPDAASGPGLKSNLTSVPMP
TSTGLLTLPACPEESPLLVGPMVIDFNIPVDLELLAKKNPEIKMGGRYFPKDCISPHKVA
IIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTMFNRAKLLNVGFQEALKDY
DYNCFVFSDVDLIPMDDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLT
INGFPNNYWGWGGEDDDIFNRLVHKGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRI
AHTKETMRLDGLNSLTYQVLDIQRYPLYTKITVDIGTPR
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgaggtttcgtgagccgttcctgggcggcagcgccgcgatgccgggcgcgaccctgcag
cgggcctgccgcctgctcgtggcggtctgcgcgctgcaccttggcgtcaccctggtctat
tacctctccggtcgcgatctgagccgcctgccccaactggtcggagtctcctcttcactg
caaggcggcacgaacggcgccgccgccagcaagcagccctcgggagagctccggccccgg
ggcgcgcggccgccgcctcctttaggcgtctccccgaagcctcgcccgggttctgactcc
agccctgatgcggcttctggccccggcctgaagagcaacttgacttcggtgccaatgccc
accagcactggattgttgactctgcctgcttgccctgaggagtccccgctgctcgttggc
cccatggtgattgactttaatattcctgtggatctggagcttttggcaaagaagaaccca
gagataaagatgggcggccgttacttccccaaggactgtatctcccctcacaaggtggcc
atcattatcccattccgtaaccggcaggagcacctcaaatactggctgtattatttgcat
ccagtccttcagcgccagcaactcgactatggcatctacgtcatcaatcaggctggagac
accatgtttaatcgagctaagctgctcaacgttggctttcaagaggccttgaaagactat
gactacaactgctttgtgttcagtgatgtggacctcattccaatggatgaccataatgcc
tacaggtgcttttcacagccacggcatatttctgtcgcaatggacaagttcgggtttagc
ctgccttacgttcagtattttggaggtgtctccgctctcagtaaacaacagttccttacc
atcaatggatttcctaataattactggggctggggaggagaagatgatgacatttttaac
agattagttcataaaggcatgtctatatcacgcccaaatgctgtggtaggcaggtgtcgc
atgatccggcactcaagagacaagaaaaatgagcccaaccctcagaggtttgaccggatc
gcacatacaaaggaaacgatgcgccttgatggtttgaactcacttacctaccaggtgttg
gacatacagagatacccgttatataccaaaatcacagtggacatcgggacaccaagatag

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