KEGG   Rattus norvegicus (rat): 25581Help
Entry
25581             CDS       T01003                                 

Gene name
Psmc2, MSS1
Definition
(RefSeq) proteasome 26S subunit, ATPase 2
  KO
K03061  26S proteasome regulatory subunit T1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03050  Proteasome
rno05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    25581 (Psmc2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    25581 (Psmc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rno03051]
    25581 (Psmc2)
Proteasome [BR:rno03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     25581 (Psmc2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: AAA AAA_lid_3 AAA_22 AAA_5 AAA_16 AAA_28 AAA_2 RuvB_N AAA_7 AAA_18 Sigma54_activ_2 AAA_33 DUF815 Mg_chelatase TIP49 AAA_24 IstB_IS21 Sigma54_activat
Motif
Other DBs
NCBI-GeneID: 25581
NCBI-ProteinID: NP_150239
RGD: 3428
Ensembl: ENSRNOG00000012026
UniProt: Q63347
Structure
PDB: 

Position
4q11
AA seq 433 aa AA seqDB search
MPDYLGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN
ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK
FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC
KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPV
IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML
ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR
SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY
AKFSATPRYMTYN
NT seq 1302 nt NT seq  +upstreamnt  +downstreamnt
atgccggattacctaggtgcagaccagcggaaaaccaaagaggatgagaaggacgacaag
cccatccgagctctggatgaaggggatatcgccttgttgaaaacttatggccagagtact
tattcgaggcagatcaagcaggttgaagatgacattcagcaacttcttaaaaaaattaat
gagctcactggtatcaaagagtccgacactgggctggcccctccagccctctgggatttg
gctgcagacaaacagacacttcagagtgaacagccgctacaggttgcaagatgtaccaag
ataatcaacgccgattcagaggacccgaaatacatcatcaacgtgaagcagtttgccaag
ttcgtggtggatctcagtgatcaggtggcacctactgacattgaggaagggatgagagtc
ggcgtggacagaaataaataccaaattcacattccactgcctcctaagattgacccaaca
gttaccatgatgcaggtggaggaaaaacctgatgtcacatacagtgacgttggtggctgt
aaggaacagattgagaaattgcgggaagtggttgaaacccctctactccatccagagagg
tttgttaaccttggaatcgagcctccgaagggtgtgttgttatttgggccaccaggcaca
ggcaagaccctctgtgccagggcagtggccaatcggactgatgcttgcttcatcccagtt
atcgggtctgagcttgtacagaagtacgtcggtgagggggctcgaatggttcgggagctt
tttgaaatggccaggacaaaaaaagcctgccttattttctttgatgaaattgatgccatt
ggaggggctcggtttgacgatggcgctgggggtgacaatgaggtgcagaggaccatgttg
gagctcatcaatcagctggatggctttgatcctcggggcaacatcaaagtgctcatggcc
actaaccgacctgatactctggacccagcgctgatgaggccagggaggctggacagaaag
attgagttcagcttacctgacttagagggtcgaacgcacatctttaagattcatgctcgc
tcaatgagtgtggaaagagacatccgatttgagctactagcccgcctgtgtccaaacagt
actggagcggagattagaagcgtttgcacagaggctggtatgtttgcaatccgagcccgg
agaaagattgctacagagaaggacttcttagaagctgtaaataaggtcatcaagtcgtat
gccaaatttagtgctactccccgctacatgacatacaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (25)   
   RefSeq(nuc) (1)   
   GenBank (12)   
   EMBL (12)   
Protein domain (18)   
   Pfam (18)   
All databases (57)   

Download RDF
DBGET integrated database retrieval system