KEGG T01003: 25705

Rattus norvegicus (rat): 25705

Entry

25705             CDS       T01003

Symbol

Zeb1

Name

(RefSeq) zinc finger E-box-binding homeobox 1

K09299

zinc finger homeobox protein 1

Organism

rno Rattus norvegicus (rat)

Pathway

rno05202

Transcriptional misregulation in cancer

rno05206

MicroRNAs in cancer

rno05215

Prostate cancer

Brite

KEGG Orthology (KO) [BR:rno00001]
09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    25705 (Zeb1)
   05206 MicroRNAs in cancer
    25705 (Zeb1)
  09162 Cancer: specific types
   05215 Prostate cancer
    25705 (Zeb1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    25705 (Zeb1)
Transcription factors [BR:rno03000]
Eukaryotic type
  Helix-turn-helix
   Homeo domain ZF
    25705 (Zeb1)

SSDB

Motif

Pfam:

zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_jaz zf-Di19 zf-met Homeodomain zf-C2H2_15 Zf-C2H2_ZNF451_C zf-C2H2_6 Zn_SUZ12 zf-C2HE Zn_ribbon_8

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

RGD:

Ensembl:

UniProt:

Position

17:complement(56644397..56811155)

AA seq 1109 aa
MADGPRCKRRKQANPRRNNVTNYNTVVEANSDSDDEDKLHIVEEESVTDAADCEGGVPDD
ELPTDQTVLPGGSDRAGSAKNCWQDDVKDDECDSDAENEQNHDPNVEEFLQQQDTAVIYP
EAPEEDQRQGTPEASGHDDNGTPDAFSQLLTCPYCDRGYKRFTSLKEHIKYRHEKNEDNF
SCSLCSYTFAYRTQLERHMTSHKSGREQRHVTQSGGNRKFKCTECGKAFKYKHHLKEHLR
IHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVNGRPRSGLKTSQCSSPSLSTSP
GSPTRPQIRQKIENKPLQEPLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFSGGGQ
LQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNIIRQVLENNQASLASKE
QEAVSASSIQQGGHSVISAISLPLVDQDGTTKIIINYSLEQPGQLQVVPQNLKKENPAPP
KSCKSEKSPEDLTVKSEKDKSFDGAADESTCLLCEDCPGDLNALPELKHYDPEHPAQPPP
PAPATEKPESSASSAGNGDLSPSQPPLKNLLSLLKAYYALNAQPSTEELTKIADSVNLPL
DVVKKWFEKMQAGQIPGQSLEPPSPGPGSGNIPAKTEEQPQPVDGNEPQEDSTRGQSPLK
MTSSPVLPVGSAINGSRSCTSSPSPLNLSSARNPQGYSCVSEGTQEEPQVEPLDLSLPKQ
QGELLERSTVSSVYQNSVYSVQEEPLNLSCAKKEPQKDSCVTDSEPVVNVVPPSANPINI
AIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSATVSPAMQEPPVKVIQ
PNGNQDERQDTSSEGVSVEDQNDSDCTPPKKKTRKAENGMYACDLCDKIFQKSSSLLRHK
YEHTGKRPHECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRY
SYCKRGAEDRDAMEQEDTGPEALPEVLPTELVGARASPSQADSDERESLTREEDEDSEKE
EEEEDKEMEELQEDKECENPQEEEEEEEEEEEEEEEEEEEEAEEAEHEAAAAKTGGAVEE
EAAQQAGSFQQKASGSESKRLSEEKTNEA

NT seq 3330 nt +upstreamnt +downstreamnt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataatactgtggtagaagcaaattcagattcggatgatgaagacaaactccat
attgtggaagaagaaagtgtcacagatgcagctgactgtgaaggtggtgtgccagatgat
gagctgccaacagaccagacagtgttaccaggaggcagtgacagggcgggcagtgccaag
aactgctggcaagacgacgtaaaagatgacgaatgcgactcagatgcagaaaacgagcaa
aaccatgatcccaacgtggaagagttcctgcagcaacaggacaccgcggtcatctaccct
gaggcacccgaggaggaccagcggcagggcacgccagaagccagcggtcatgatgacaat
ggaacaccagatgcattttcccagttgctcacctgcccgtattgtgatagaggctacaag
cgctttacctctttgaaagaacacattaagtaccgccatgagaagaatgaagacaacttc
agctgctccctgtgcagttacacctttgcatacagaacccagcttgaacgtcatatgaca
tcacataagtcaggaagagagcaaagacatgtgacacagtctggaggtaaccgtaagttc
aagtgcaccgagtgtgggaaagcgttcaagtacaaacaccatctgaaggagcacttacgg
atccacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccattct
ggctcttatagctcacacataagcagtaagaagtgtattagcttgatgcctgtgaatggt
aggcccagatcaggactcaagacatctcagtgttcctcgccatctctttcaacatcacca
ggcagtcccacacgcccacagatacggcagaagatagagaataaaccccttcaagaaccg
ctttctgtaaaccaaatcaaaactgaacctgtggattatgagttcaaacccatagtggtt
gcttcaggaatcaactgttcaacccctttacaaaatggggtttttagcggtggtggccaa
ttgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctgccaacagttggt
ttggtatctcccataagtatcaacttaagtgacattcagaatgtacttaaagtggctgta
gatggtaacataatacgacaggttttggagaataatcaagccagtcttgcatccaaagag
caagaagccgtgagtgcttcatccatccagcagggcggccattctgtcatttctgccatc
agtcttcctttagttgatcaggatggcacaaccaaaatcatcatcaactacagtcttgag
cagcccggccaacttcaggttgttccccagaatctaaagaaagaaaacccagcccctcca
aagagctgcaaaagtgagaagtcaccagaagatcttactgtcaagtcagagaaggacaaa
agctttgatggggctgcggatgagagcacttgccttttgtgtgaggactgcccaggagac
ctcaatgcacttccagaactaaagcactatgacccagagcaccctgctcaacctccaccc
cctgccccagccaccgagaagccagagtcctctgcttcatcagccggcaatggagatttg
tctcccagtcagccacctttaaagaaccttctgtcgctcttaaaagcctactatgctctg
aatgcacagccaagcacagaagagctcaccaagattgccgattctgtgaacctgccgctg
gatgtagttaaaaagtggtttgaaaagatgcaagctggacagattcccgggcagtctctt
gaaccaccttctccaggaccggggtcaggaaacatccctgcaaaaactgaggagcagcct
caacctgtggatggaaatgagccccaggaagacagcacacgtggacagagtcctctcaag
atgacaagctctccagttttaccagtaggatcagccattaacggttccagaagttgcaca
tcatccccatcccctctaaacctttcctcagccaggaacccgcagggttactcttgtgtg
tcagagggtacccaggaggagccccaagtagaacctcttgatctctcactaccaaagcaa
cagggagagttactggaaaggtcgacagtcagtagcgtttaccagaacagtgtttattct
gtccaggaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaaggacagttgt
gttacagactcagaaccagttgtaaatgtagtcccaccaagtgccaaccccataaacatt
gctattcctacagtcactgcccagttacccacaatcgtggccatcgctgaccagaacagt
gttccgtgcttacgggcactcgctgccaacaagcagactattctgattccccaagtggca
tatacatactccgctacagtcagcccagccatgcaggagccaccagtgaaggtgatccag
ccaaatggaaaccaggatgaaagacaagacactagctcagaaggagtctccgtggaggac
cagaatgactctgactgcacgccacccaaaaagaaaactcggaaggcagagaatgggatg
tacgcatgtgacctgtgtgacaagatatttcagaagagcagctccctgctgagacacaaa
tatgagcatacaggtaagaggccccacgagtgcggaatctgtagaaaggcatttaaacac
aagcatcatttgattgagcacatgcgactgcactctggggaaaagccctaccaatgtgac
aagtgtggcaagcgcttctcacactcggggtcttactctcaacacatgaatcaccgctac
tcctactgcaagagaggagctgaagacagagatgccatggagcaggaagacactgggccg
gaagccctgccggaagtcctgcccactgagcttgttggtgcccgggcatctccctcacag
gctgactcggacgagagagaaagtttgacaagggaagaggatgaagacagtgaaaaggag
gaggaggaggaggataaagagatggaagaattgcaggaagacaaggaatgtgagaaccca
caggaggaggaggaggaggaagaggaggaagaagaagaggaggaggaggaagaggaagag
gaggcagaggaagctgagcatgaggcggcagcagccaagactgggggtgcagtggaggag
gaagcggctcagcaggcaggcagcttccagcagaaggccagcgggagcgagagcaagcga
ctgtctgaagagaagacaaatgaagcctag

All links

Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (14)   
   RefSeq(nuc) (6)   
   GenBank (4)   
   EMBL (4)   
Protein domain (13)   
   Pfam (13)   
All databases (39)   

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