KEGG   Rattus norvegicus (rat): 292022
Entry
292022            CDS       T01003                                 
Symbol
Ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    292022 (Ddx19a)
   03015 mRNA surveillance pathway
    292022 (Ddx19a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    292022 (Ddx19a)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     292022 (Ddx19a)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     292022 (Ddx19a)
SSDB
Motif
Pfam: DEAD Helicase_C Cas3-like_C_2
Other DBs
NCBI-GeneID: 292022
NCBI-ProteinID: NP_001005381
RGD: 1303136
Ensembl: ENSRNOG00000018033
UniProt: Q68FX3
Position
19:complement(55851854..55872209)
AA seq 478 aa
MATDSWALAVDEQEAAVKSMNSLQIKEEKVKADTNGVIKTSTTAEKTEEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRHPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAVRGNKLERGQKVGEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggccaccgactcctgggcgctggcggtggacgagcaggaagccgctgtcaagtcgatg
aacagtttgcagatcaaggaagagaaagtcaaagcagacaccaatggtgttatcaaaacc
agcaccactgcagaaaagacagaggaagaagagaaagaggacagagctgctcagtcttta
ctcaacaagctgatcagaagcaatcttgtggataacaccaaccaagtggaagtcctgcag
agggacccgagctccccgctctactcagtgaagtccttcgaggagcttcgcctgaaacca
cagcttctccaaggagtctatgccatgggcttcaatcgaccatccaagatccaggagaat
gctttgcccatgatgcttgctgaacccccacagaacctgattgcacagtcccagtctggt
actgggaaaacagctgcctttgtcttagctatgctcagcagagtggaaccagcagacaga
caccctcagtgtttgtgcctgtccccaacatacgagctggcactgcaaacaggaaaagtg
attgagcagatgggcaaatttcatccagaattgaagctagcttatgctgttcgaggcaat
aaattggaaagaggtcagaaggtcggtgagcagattgtcatcggtacccctgggaccgtc
ctggactggtgctccaaactgaagttcattgaccccaagaagatcaaggtgtttgttctg
gacgaggctgatgtgatgatagcgactcagggccaccaagaccagagcatccgcatccag
aggatgctgcccagaaactgccagatgctgcttttctctgccacctttgaagactcagtg
tggaagtttgcccagaaggtggtcccagaccccaacatcatcaagctgaagcgtgaagag
gagacgttggataccatcaaacagtattatgtcctttgcaataacagagaggagaagttc
caggccctgtgcaacttgtacggggccatcaccatcgcccaagccatgatcttctgccat
acccgcaaaacagctagctggctggcggcagagctctccaaagagggccaccaggtggcc
ctgctgagtggagagatgatggtggagcagagggctgctgtgatcgagcgcttcagagaa
ggcaaagagaaggttctggtgaccaccaacgtgtgtgcccgtggtattgatgttgaacaa
gtgtctgtggtcatcaattttgaccttcctgtggacaaggacgggaacccagacaatgag
acctacctgcaccgcattgggcgcacaggccgctttggcaagaggggcctggcagtaaac
atggttgacagcaagcacagcatgaatatcctcaacagaatccaggagcatttcaataag
aagatagaaagattggacacagatgacttggacgagatcgagaaaatagccaactga

  All links  
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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KEGG   Rattus norvegicus (rat): 690693
Entry
690693            CDS       T01003                                 
Symbol
Ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    690693 (Ddx19b)
   03015 mRNA surveillance pathway
    690693 (Ddx19b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    690693 (Ddx19b)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     690693 (Ddx19b)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     690693 (Ddx19b)
SSDB
Motif
Pfam: DEAD Helicase_C Cas3-like_C_2
Other DBs
NCBI-GeneID: 690693
NCBI-ProteinID: NP_001005895
RGD: 1593382
Ensembl: ENSRNOG00000064019
UniProt: Q5XLP8
Position
19:complement(55877567..55910134)
AA seq 479 aa
MATDSWALAVDEQEAAAESLSNLHLKEEKIKPDANGAVVKTSANTEKTEEDEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANNHPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKVGEQIVIGTPGTVLDWCSKMKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggccacggattcttgggccctagcagtggacgagcaggaagccgccgctgagtcgttg
agcaacttgcatcttaaagaggagaaaatcaaaccagatgccaatggtgctgttgttaag
accagtgctaacacagagaagacagaggaagatgagaaagaggacagagctgctcagtct
ttactcaacaagctgatcagaagcaatcttgtggataacaccaaccaagtggaagtcctg
cagagggacccgagctccccgctctactcagtgaagtccttcgaggagcttcgcctgaaa
ccacagcttctccagggagtctatgccatgggtttcaaccgcccttccaagatccaggag
aatgcactgcctttgatgcttgctgagcccccacagaacttaattgcccagtctcagtct
ggtactgggaaaacagctgccttcgtgttggccatgctcagccaagtagagcctgcaaac
aaccatccccagtgtctctgcctctctccaacctatgagctggctcttcaaacaggaaaa
gtgattgagcagatgggcaagttttaccctgaactgaagttagcttatgctgttcgaggc
aataaattggaaagaggtcagaaggtcggtgagcagattgtcatcggtacccctgggacc
gtcctggactggtgctccaaaatgaagttcattgaccccaagaagatcaaggtgtttgtt
ctggacgaggctgatgtgatgatagcgactcagggccaccaagaccagagcatccgcatc
cagaggatgctgcccagaaactgccagatgctgcttttctctgccacctttgaagactca
gtgtggaagtttgcccagaaggtggtcccagaccccaacatcatcaagctgaagcgtgaa
gaggagacgttggacaccatcaaacagtattatgtcctttgcaataacagagaggagaag
ttccaggccctgtgcaacttgtacggggccatcaccatcgcccaagccatgatcttctgc
catacccgcaaaacagctagctggctggcggcagagctctccaaagagggccaccaggtg
gccctgctgagtggagagatgatggtggagcagagggctgctgtgatcgagcgcttcaga
gaaggcaaagagaaggttctggtgaccaccaacgtgtgtgcccgtggtattgatgttgaa
caagtgtctgtggtcatcaattttgaccttcctgtggacaaggacgggaacccagacaat
gagacctacctgcaccgcattgggcgcacaggccgctttggcaagaggggcctggcagta
aacatggttgacagcaagcacagcatgaatatcctcaacagaatccaggagcatttcaat
aagaagatagaaagattggacacagatgacttggacgagatcgagaaaatagccaactga

  All links  
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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