KEGG T01003: 29710

Rattus norvegicus (rat): 29710

Entry

29710             CDS       T01003

Symbol

Scn8a

Name

(RefSeq) sodium channel protein type 8 subunit alpha

K04840

voltage-gated sodium channel type VIII alpha

Organism

rno Rattus norvegicus (rat)

Brite

KEGG Orthology (KO) [BR:rno00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    29710 (Scn8a)
Ion channels [BR:rno04040]
Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   29710 (Scn8a)

SSDB

Motif

Pfam:

Ion_trans Na_trans_assoc Na_trans_cytopl IQ_SCN5A_C PKD_channel IQ GPHH HB_ELP1 Lustrin_cystein

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

RGD:

Ensembl:

UniProt:

Position

7:133860901..134034809

AA seq 1978 aa
MAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTRGF
DWEEYINNKTNFYMVPGMLEPLLCGNSSDAGQCPEGFQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEDGVGSPRSSSEL
SKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGMRRKAFRLPDNRIGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDS
LFIPIRARERRSSYSGYSGYSQCSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGPGSHIGR
LLPEATTEVEIKKKGPGSLLVSMDQLASYGRKDRINSIMSVVTNTLVEELEESQRKCPPC
WYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFE
HVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
ECVCKINQECKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWTKVKVHAFMQAH
FKQREADEVKPLDELYEKKANCIANHTGVDIHRNGDFQKNGNGTTSGIGSSVEKYIIDED
HMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSSSEGSTIDIKPE
VEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRKTCFLIVEHNWFET
FIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTN
AWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEIRFEIDIVNNKTDCEKLMEG
NSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPDYEGNIYMYI
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFV
IFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLA
RIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGI
DDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVG
IFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQF
IEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGEL
DILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGHLARRGFICRKMAS
NKLENGGTHRDKKESTPSTASLPSYDSVTKPDKEKQQRAEEGRRERAKRQKEVRESKC

NT seq 5937 nt +upstreamnt +downstreamnt
atggcagcgcggctgctcgcaccaccaggccctgatagtttcaagcctttcacccctgag
tcgctggcaaacatcgagaggcgtattgccgagagcaagctcaagaaaccaccaaaggcg
gatggcagccaccgggaagacgatgaagacagcaagcccaagccaaacagtgacctggag
gctgggaagagtttgcctttcatctacggggacatcccgcaaggcctggttgcggttccc
ctggaggactttgacccttactatttgacgcagaaaacctttgtagtattaaacagaggg
aaaactctcttcagatttagtgccacacctgccttgtacattttaagcccttttaacctg
ataagaagaatagctattaaaattttgatacactcagttttcagcatgatcatcatgtgc
accatcctgaccaactgtgtgttcatgacctttagtaaccctccagaatggtccaagaat
gtggagtacacattcacagggatttacacatttgaatcactagtgaaaatcatcgcaaga
ggtttctgcatagacggcttcaccttcttacgagacccgtggaactggttagacttcagt
gtcatcatgatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctccgagctttgaaaactatctctgtaattccaggcctgaagacaatc
gtgggcgccctaatccagtccgtgaagaagctgtcggacgtgatgatcctgacagtgttc
tgcctgagtgttttcgccctgattggcctgcagctcttcatggggaaccttcgaaacaag
tgtgtcgtgtggcccataaacttcaacgagagctacctggagaacggcaccagaggcttt
gactgggaggagtatatcaacaataaaacaaacttttacatggttcctggcatgctagaa
cccttgctctgcgggaacagttctgatgctgggcaatgcccagagggattccagtgcatg
aaagcaggaaggaaccccaactacggttacaccagctttgacaccttcagctgggccttc
ttggcattattccgccttatgacccaggactattgggagaacttataccagctgacctta
cgagccgctgggaaaacgtacatgatcttctttgtcttggtcatcttcgtgggttctttc
tatctggtgaacttgatcttggctgtggtggccatggcttatgaggaacagaaccaggca
acactggaggaggcagagcaaaaagaggccgagttcaaggcaatgctggagcaactcaag
aagcagcaggaggaggcacaggctgctgcaatggccacctcagcgggcactgtctcggaa
gacgccattgaagaagaaggggaagatggggtaggctctccgaggagctcatctgaactg
tctaaactcagttccaagagcgcgaaggagcggcggaaccgacggaagaagaggaagcag
aaggagctctctgaaggcgaggagaaaggggacccagagaaggtgtttaagtcagagtcg
gaagacggtatgagaaggaaggccttccggctgccagacaacaggatagggaggaagttt
tccatcatgaatcagtcgctgctcagcattccaggctcgcccttcctctcccgacataac
agcaaaagcagcatcttcagcttccggggacccggtcggttccgggaccccggctctgag
aatgagttcgcagacgatgaacacagcaccgtggaggagagcgagggccggcgtgactcg
ctcttcatcccgatccgcgcccgcgagcgccgcagcagctacagtggctacagcggctac
agccagtgcagccgctcgtcgcgcatcttccccagcctgcggcgcagcgtgaagcgcaac
agcacggtggactgcaacggcgtggtgtcactcatcgggcccggctcacacatcgggcgg
ctcctgcctgaggcaacgactgaggtggaaattaagaagaaaggccctggatctctttta
gtttctatggaccaactcgcctcctacggacggaaggacagaatcaacagcataatgagc
gtggtcacaaacacgctagtggaagagctggaagagtctcagagaaagtgcccaccgtgc
tggtataagtttgccaacactttcctcatctgggagtgtcacccctactggataaaactg
aaggagatcgtgaacttaatcgtcatggacccttttgtagacttagccatcaccatctgc
atcgttctgaatacgctatttatggcaatggagcaccatcccatgacaccacagttcgaa
cacgtcttggccgtaggaaatctggtgttcaccgggatcttcacggcggaaatgtttctg
aagctcatagccatggacccctactattatttccaagaaggctggaacatttttgacgga
tttattgtctccctcagtttaatggagctgagtctcgcagatgtggaggggctctcagtg
ctgcggtctttccgactgctccgagtcttcaagctggccaagtcctggcccaccctgaac
atgctgatcaagatcatcgggaactccgtgggtgccctgggcaacctgaccctggtgctg
gccatcatcgtcttcatcttcgccgtggtggggatgcagctgtttggaaagagttacaag
gagtgcgtctgtaagatcaaccaggagtgcaagctcccgcgctggcacatgaacgacttc
ttccactccttcctcatcgtcttccgagtgctgtgtggggagtggatcgagaccatgtgg
gactgcatggaggtggccggccaggccatgtgcctcattgtcttcatgatggttatggtc
attggcaacctggtggtgctgaacctattcctggccttgcttctgagctccttcagcgca
gacaacctggcggccacagacgacgacggggaaatgaacaacctgcagatctcagtgatc
cggatcaagaagggcgtggcctggaccaaagtgaaggtgcacgccttcatgcaggctcac
ttcaagcagcgggaggcggatgaagtgaaacccctcgacgagctgtatgagaagaaggcc
aactgcatcgccaaccacacgggcgtggatatccaccggaacggcgacttccagaagaac
gggaacggaaccaccagcggcatcggcagcagcgtggagaagtacatcatcgacgaggac
cacatgtccttcattaacaacccaaacctgaccgtccgggtgcccattgctgtgggcgag
tctgacttcgagaacctcaacacagaggatgttagcagcgaatcagaccctgaaggcagc
aaagataaactggacgataccagctcctcagaaggaagtaccatcgacatcaagcctgag
gtggaagaagttcccgtggagcaacctgaggaatacttggatccggacgcctgctttaca
gagggttgcgtccagcggttcaagtgctgccaggtcaacatcgaggaaggactaggcaag
tcgtggtggatcttgcggaaaacctgcttcctcattgtggagcacaattggtttgagacc
ttcatcatcttcatgattctgctcagcagtggcgccctggcctttgaggacatctacatt
gagcagaggaagaccatccgcaccatcctggagtatgcggacaaggtcttcacctacatc
ttcatcctggagatgttgctcaagtggacagcctacggcttcgtcaagttcttcaccaat
gcctggtgctggttggacttcctcattgtggctgtctctttagtcagccttatagctaat
gccctgggctactcggaactaggtgccataaagtcccttaggaccctaagagctttgaga
cccttaagagccttatcacgatttgaagggatgagggtggtggtgaatgccttggtgggc
gccatcccctccatcatgaatgtgctgctggtgtgtctcatcttctggctgattttcagc
atcatgggagttaacctgtttgcggggaaataccactactgctttaacgagacttctgaa
atccggttcgaaatcgatattgtcaacaataaaacggactgtgagaagctcatggagggc
aacagcacggagatccgatggaagaatgtcaagatcaactttgacaatgtcggagcaggg
tacctggcccttcttcaagtggcaaccttcaaaggctggatggacatcatgtatgcggct
gtagattcccgaaagccagacgagcagcctgactacgagggcaacatctacatgtacatc
tacttcgtcatcttcatcatcttcggctccttcttcaccctcaacctgttcatcggtgtc
atcatcgacaacttcaaccagcagaagaaaaagtttggaggtcaggacatcttcatgaca
gaggaacagaagaagtactacaatgccatgaaaaagctgggctccaagaagccacagaag
cccatcccccgacccttgaacaaaatccaagggattgtctttgatttcgtcactcaacaa
gcctttgacattgtgatcatgatgctcatctgccttaacatggtgacaatgatggtggag
acagacactcagagcaagcagatggagaacattctttactggattaatctggtctttgtc
atcttcttcacctgcgagtgtgtgctcaaaatgtttgccttgagacactactatttcacc
attggctggaacatctttgactttgtggtggtcatcctctccattgtgggaatgttcctg
gctgatatcattgagaagtacttcgtctccccaaccctattccgagttatccgattggcc
cgtattgggcgcatcttgcgtctgatcaagggcgccaaagggatccgcaccctgctcttt
gccttaatgatgtcgctgcccgccctgttcaacatcggcctcctgctcttcctcgtcatg
ttcatcttctccatttttggcatgtccaacttcgcatacgtgaagcacgaggccggcatt
gacgacatgttcaacttcgagacatttggcaacagcatgatctgtttgttccagatcaca
acgtctgctggctgggatggcctgctgctgccaatcctgaaccgcccccctgactgcagc
ttggacaaagagcacccagggagtggcttcaaaggggactgtgggaacccctcggtgggc
atcttcttctttgtgagctacatcatcatctccttcctgattgtggtgaacatgtacatc
gccatcatcctggagaacttcagcgtggccaccgaggagagcgccgaccctctgagtgag
gatgacttcgagactttctatgagatctgggagaagtttgacccagacgccacccagttc
atcgagtactgtaagctggcagactttgccgacgccctggagcacccgctccgagtaccc
aagcccaacaccatcgagctcatcgccatggacctgcccatggtgagcggagatcgcatc
cactgcttggacatccttttcgccttcaccaagcgagtcctgggagacagtggggagttg
gacatcctgcggcagcagatggaggagcggttcgtggcatccaatccttccaaagtgtct
tacgagcctatcacaaccactctgcggcgcaagcaggaggaggtgtctgcagtggtcctg
cagcgtgcctacaggggacacttggctaggcggggcttcatctgcagaaagatggcctcc
aacaagctggagaatggaggcacacacagagacaagaaggagagcaccccgtccacagcc
tccctcccctcttacgacagcgtcacaaagccagacaaggagaagcagcagcgtgcggag
gagggcagaagggaaagagccaagaggcaaaaagaggtcagggagtccaagtgctag

All links

Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (16)   
   RefSeq(nuc) (8)   
   GenBank (4)   
   EMBL (4)   
Protein domain (9)   
   Pfam (9)   
All databases (40)   

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